# [ GGGenome | 2025-04-04 18:42:17 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TGTTGAGCGAGCTTAAACGA # count: 17 # query: TCGTTTAAGCTCGCTCAACA # count: 6 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins BE208883|BE208883.1 GF-FV-P3C3 Marsh grapefruit young flavedo Citrus x paradisi cDNA, mRNA sequence. + 50 69 GCGAAAGACACAAAATTAACAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACNGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCG 1 169 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 C23883|C23883.1 Citrus unshiu cDNA, clone: pcMFRI616.34, 5'-end sequence. + 45 64 GGCACGAGCGGCACGAGCAACGCTAACAAAACAAATATAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 164 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CB291369|CB291369.1 UCRCS01_02db10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02db10, mRNA sequence. + 64 83 GCACCAGGCGCAACGCGAAAGACACTAAATTAACAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGCGCGGAGGTGCAAGGCCG 1 183 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CB293309|CB293309.1 UCRCS01_05df03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05df03, mRNA sequence. + 59 78 GCCCGTGGCGCGAAAGACACAAAATTAACAACGCCGCTAACAACACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 178 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CK740327|CK740327.1 USDA-FP_6471 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H08 5', mRNA sequence. + 56 75 ATTCACAACGCGAAAGACACAAAATTAACAACGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACCGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCG 1 175 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CK936611|CK936611.1 CGF1004520_C03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_C03 5', mRNA sequence. + 71 90 CGGGGACTCACCANNNACAACGCGAAAGACACAAAATTAACAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 190 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CK936628|CK936628.1 CGF1004520_B09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_B09 5', mRNA sequence. + 66 85 GGGGACCATTCACAACGCGAAAGACACAAAATTAACAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGTGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 185 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CK938253|CK938253.1 CGF1004476_B02 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IIF_B02 5', mRNA sequence. + 65 84 GCGGGGATTCACAACGCGAAAGACACAAAATTNNNAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 184 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 DC893414|DC893414.1 Citrus unshiu mRNA, clone: MFI6G34, 5'-end sequence, expressed in juice sac. + 38 57 CGGCACGAGCAACGCTGAACAAAACAAATATAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 157 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 DC893414|DC893414.1 Citrus unshiu mRNA, clone: MFI6G34, 5'-end sequence, expressed in juice sac. + 559 578 CTGTAATATAACTAACTCTGCAAGTCGGATCGTTTAATGTAATTATTTACCTCCACGGCACGAGCGGCACGAGCAACGCTAACAAAACAAATATAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 459 678 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 DN959314|DN959314.1 USDA-FP/ARO_15144 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-22_G11 5', mRNA sequence. + 42 61 CACAAAATTAACAACAACGCTAACAAAACAAATATAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 161 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 DY306812|DY306812.1 KN0AAL3DA09FM1 KCl-Salt1 Citrus reshni cDNA 5', mRNA sequence. + 48 67 CGCGAAAGACACAAAATTAACAACGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 167 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 EX447630|EX447630.1 Volcani_8_10_F2 Volcani08 Citrus reticulata x Citrus temple cDNA, mRNA sequence. + 85 104 CATGGATGGCATTACGGCCGGGGACCATTCACAACGCGAAAGACACAAAATTAATAACGCCGCTAACAAAACAAGTACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTCCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 204 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 EY661221|EY661221.1 CS00-C1-101-030-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence. + 74 93 CCACGCGTCCGCACCATTCACAACGCGAAAGACACAAAATTAACAACGCCGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAATAAAAGATTTTCCTCCAAGGATT 1 193 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 EY746552|EY746552.1 CS00-C5-003-035-A12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence. + 48 67 CGCGAAAGACACAAAATTAACAACGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGTA 1 167 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 EY748181|EY748181.1 CS00-C5-003-054-E06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence. + 48 67 CGCGNAAGACCAAACCCCCTTAACGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 167 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 FC918978|FC918978.1 KN0AAL3DA09FM1 KCl_Salt1 Citrus reshni cDNA clone KN0AAL3DA09, mRNA sequence. + 48 67 CGCGAAAGACACAAAATTAACAACGCTAACAAAACAAATACAAATCTTGTTGAGCGAGCTTAAACGAATTGATTCCCCTTTCATTTCTTTCAAACAATATACTTACGGAGATGACTTACCTGAACAGGGTGTGGATGGCGGCAACCGTGGCGGTGGTGCAAGGCCGT 1 167 TGTTGAGCGAGCTTAAACGA TGTTGAGCGAGCTTAAACGA |||||||||||||||||||| ==================== 20 0 0 0 CB291368|CB291368.1 UCRCS01_02db10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02db10, mRNA sequence. - 430 449 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTGTATTTGTTTTGTTAGCGGCGTTGTTAATTTTGTGTCTTTCGCGTTGTGCCTCGTGC 330 512 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0 CB293308|CB293308.1 UCRCS01_05df03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05df03, mRNA sequence. - 467 486 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTGTATTTGTTTTGTTAGCGGCGTTGTTAATTTTGTGTCTTTCGCGCCTCGTGC 367 544 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0 DC896431|DC896431.1 Citrus unshiu mRNA, clone: RGP0175, 5'-end sequence, expressed in root. - 482 501 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTATATTTGTTTTGTTAGCGTTGTTGTTAATTTTGTGTCTTTCGCGTTGTGAATGGTC 382 563 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0 DY298597|DY298597.1 IC0AAA96AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. - 618 637 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTGTATTTGTTTTGTTAGCGTTGTTAATTTTGTGTCTTTCGCGTTGTGAATGGTGAAAGAACTGCCGAGTTGAAGCTTGCTGTTGGTTATTTTATA 518 737 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0 FC912579|FC912579.1 IC0AAA96AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96AA05, mRNA sequence. - 618 637 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTGTATTTGTTTTGTTAGCGTTGTTAATTTTGTGTCTTTCGCGTTGTGAATGGTGAAAGAACTGCCGAGTTGAAGCTTGCTGTTGGTTATTTTATA 518 737 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0 OY754319|OY754319.1 Citrus sinensis genome assembly, chromosome: 2. - 16224607 16224626 ACGGCCTTGCACCACCGCCACGGTTGCCGCCATCCACACCCTGTTCAGGTAAGTCATCTCCGTAAGTATATTGTTTGAAAGAAATGAAAGGGGAATCAATTCGTTTAAGCTCGCTCAACAAGATTTGTATTTGTTTTGTTAGCGTTGTTAATTTTGTGTCTTTCGCGTTGTGAATGGTGAAAGAACTGCCGAGTTGAGCTTGCTGTTGGTTATTTATAGA 16224507 16224726 TCGTTTAAGCTCGCTCAACA TCGTTTAAGCTCGCTCAACA |||||||||||||||||||| ==================== 20 0 0 0