# [ GGGenome | 2025-03-14 21:28:15 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TTCACTGGAATGTCCGTTCA # count: 1 # query: TGAACGGACATTCCAGTGAA # count: 27 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins OY743210|OY743210.1 Raphanus sativus genome assembly, chromosome: 4. + 39848113 39848132 TCATGGATCTCAAAGGACTCTTTACCCAACAATGCTTAGGAATGGCCGCTCTTATATCTCCGATCTTAAACGGTGGTTGTGCGCTCGGATCAAACCTTTCTTCACTGGAATGTCCGTTCACATTGCTACGCTGGTCCATAGCGACAACCATCGCCTGAGAAAGAGAGAGAGAGAGAGAGAGCTTTGAGGGATGTTTCTCTCTCTCTAAAACTAAAACTGT 39848013 39848232 TTCACTGGAATGTCCGTTCA TTCACTGGAATGTCCGTTCA |||||||||||||||||||| ==================== 20 0 0 0 EW715529|EW715529.1 RS1AM64TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 144 163 ACAGTTTTAGTTTTAGAGGGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 44 263 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EW717183|EW717183.1 RS1AX57TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 144 163 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCCCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 44 263 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EW724946|EW724946.1 RS2B570TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 138 157 CCACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 38 257 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EX895588|EX895588.1 RS2BW42TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 138 157 CCACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 38 257 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EX905121|EX905121.1 RS3CG54TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 138 157 CCACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATAGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGACCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 38 257 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EY896670|EY896670.1 RR1D004TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence. - 140 159 ACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 40 259 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 EY923400|EY923400.1 RR4DQ47TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. - 146 165 TTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 46 265 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FD559440|FD559440.1 RR4FJ46TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence. - 41 60 GCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 160 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FD564055|FD564055.1 RS1FJ64TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence. - 81 100 GGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 200 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FD578232|FD578232.1 RS3EY93TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence. - 142 161 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 42 261 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FD948702|FD948702.1 RS2H180TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 138 157 CCACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCATAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCTTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 38 257 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FD949330|FD949330.1 RS2H909TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence. - 137 156 ACACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 37 256 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY428418|FY428418.1 Raphanus sativus mRNA, clone: RSCF02G13, 5' end sequence. - 114 133 AGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 14 233 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY430011|FY430011.1 Raphanus sativus mRNA, clone: RSCF08J16, 5' end sequence. - 101 120 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 220 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY430200|FY430200.1 Raphanus sativus mRNA, clone: RSCF09F13, 5' end sequence. - 105 124 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 5 224 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY430796|FY430796.1 Raphanus sativus mRNA, clone: RSCF11L04, 5' end sequence. - 97 116 AGTTTTAGTTTAGAGAGAGAGAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 216 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY433037|FY433037.1 Raphanus sativus mRNA, clone: RSCF20I09, 5' end sequence. - 101 120 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 220 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY443492|FY443492.1 Raphanus sativus mRNA, clone: RSCR12F05, 5' end sequence. - 97 116 AGTTTTAGTTTAGAGAGAGAGAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 216 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY450797|FY450797.1 Raphanus sativus mRNA, clone: RSCS14D07, 5' end sequence. - 107 126 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 7 226 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY451483|FY451483.1 Raphanus sativus mRNA, clone: RSCS16C09, 5' end sequence. - 98 117 AGTTTTAGTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 217 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY451501|FY451501.1 Raphanus sativus mRNA, clone: RSCS16D05, 5' end sequence. - 84 103 AGAGAGAGAAACATCCCTCAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 203 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY451963|FY451963.1 Raphanus sativus mRNA, clone: RSCS17H13, 5' end sequence. - 100 119 ACAGTTTTAGTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 219 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FY452452|FY452452.1 Raphanus sativus mRNA, clone: RSCS18N08, 5' end sequence. - 99 118 ACAGTTTTAGTTTAGAGAGAGAGAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 218 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 FX660111|FX660111.1 TSA: Raphanus sativus var. sativus RNA, contig: WG3_4992. - 62 81 CTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 181 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 JT800863|JT800863.1 TSA: Raphanus sativus RS16316 mRNA sequence. - 99 118 AGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 218 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 KT946986|KT946986.1 Raphanus sativus var. sativus omega-3 fatty acid desaturase 3-1 type (FAD 3) mRNA, complete cds. - 32 51 ATGGTTGTTGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 1 151 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0 LR778311|LR778311.1 Raphanus sativus genome assembly, chromosome: 2. - 13802388 13802407 ACAGTTTTAGTTTTAGAGAGAGAGAAACATCCCTCAAAGCTCTCTCTCTCTCTCTCTCTTTCTCAGGCGATGGTTGTCGCTATGGACCAGCGTAGCAATGTGAACGGACATTCCAGTGAAGAAAGGTTTGATCCGAGCGCACAACCACCGTTTAAGATCGGAGATATAAGAGCGGCCATTCCTAAGCATTGTTGGGTAAAGAGTCCTTTGAGATCCATGA 13802288 13802507 TGAACGGACATTCCAGTGAA TGAACGGACATTCCAGTGAA |||||||||||||||||||| ==================== 20 0 0 0