# [ GGGenome | 2025-04-05 04:48:58 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TTCTTTGGAGCCGAACAACT # count: 5 # query: AGTTGTTCGGCTCCAAAGAA # count: 12 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins AU300560|AU300560.1 Citrus unshiu mRNA, clone: MAPEM46, 5' end, expressed in albedo. + 744 763 CATGCTTTTTCTCCATTGATTCAGAACGCAGCGACTGCCTCCCTAACACCTTAGAGGGAGGCGAAAAGATAGAACCGAAAATCCCAGAGGAGGAAGAAGATTCTTTGGAGCCGAACAACTCGTTCGTCAATGAAGAAGAGGAACCTGTTTGCTTTCTTCCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 644 847 TTCTTTGGAGCCGAACAACT TTCTTTGGAGCCGAACAACT |||||||||||||||||||| ==================== 20 0 0 0 CB291207|CB291207.1 UCRCS01_02cb08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02cb08, mRNA sequence. + 805 824 CATGCTTTTTCTCCATTGATTCAGAATGCAGAGACTCCCTCCCTAACACCTTAGAGGGAGGCGAAAAGATAGAACCGAAAATCCCAGAGGAGGAAGAAGATTCTTTGGAGCCGAACAACTCGTTCGTCAATGAAGAAGAGGAACCTGTTTGCTTTCTTCCTTCCATTTCTCCT 705 877 TTCTTTGGAGCCGAACAACT TTCTTTGGAGCCGAACAACT |||||||||||||||||||| ==================== 20 0 0 0 CX306219|CX306219.1 C18015E02Rv Drought2 Citrus reshni cDNA clone C18015E02, mRNA sequence. + 433 452 CATGCTTTTTCTCCATTGATTCAGAACGCAGAGACTCCCTCCCTAACACCTTAGAGGGAGGCGAAAAGATAGAACCGAAAATCCCAGAGGAGGAAGAAGATTCTTTGGAGCCGAACAACTCGTTCGTCAATGAAGAAGAGGAACCTGTTTGCTTTCTTCCTTCCATTTCTCTCTCTCTCTCTCTCTCCCCCGC 333 525 TTCTTTGGAGCCGAACAACT TTCTTTGGAGCCGAACAACT |||||||||||||||||||| ==================== 20 0 0 0 OX422223|OX422223.1 Sambucus nigra genome assembly, chromosome: 17. + 148472373 148472392 CAAGACGCCTCTTGGGATATAAATACATTGTATCACCCTTATTGCATGGGATCGGAAAAATAACTCAAGACAACCAATACAGTACAGTGGGCGTAGTCTATTCTTTGGAGCCGAACAACTTAAATTTTTTTTTGTGTCTTATTTGTTTAACTTATTTTCATCTGTGATCGATTAATTAGGCCTAGTCTAGTTTTTTTGCATCAACAGATTGGCGCCGTTT 148472273 148472492 TTCTTTGGAGCCGAACAACT TTCTTTGGAGCCGAACAACT |||||||||||||||||||| ==================== 20 0 0 0 OY754326|OY754326.1 Citrus sinensis genome assembly, chromosome: 9. + 10018805 10018824 GCATTCAATTATTTCCCATAAATATAATTGATAATTGATTCCACAATACCTTAGAGGGAGGCGAAAAGATAGAACCGAAAATCCCAGAGGAGGAAGAAGATTCTTTGGAGCCGAACAACTCGTTCGTCAATGAAGAAGAGGAACCTGTTTGCTTTCTTCCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCGAGGCTGCTGTTTCTTGAAAGACTGAA 10018705 10018924 TTCTTTGGAGCCGAACAACT TTCTTTGGAGCCGAACAACT |||||||||||||||||||| ==================== 20 0 0 0 DN617837|DN617837.1 UCRCS11_01M02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M02, mRNA sequence. - 321 340 AGCAGCCTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCGTTCTGAATCAATGGAGAAAAAGCATG 221 440 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 DN623232|DN623232.1 UCRCA01_03D13_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0003D13, mRNA sequence. - 322 341 AGCAGCCTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCGTTCTGAATCAATGGAGAAAAAGCATG 222 441 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 DN957829|DN957829.1 USDA-FP/ARO_13659 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-04_A03 5', mRNA sequence. - 68 87 GAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 1 187 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 DN959000|DN959000.1 USDA-FP/ARO_14830 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-18_G10 5', mRNA sequence. - 28 47 CAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 1 147 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 DN959694|DN959694.1 USDA-FP/ARO_15524 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-27_F09 5', mRNA sequence. - 52 71 GAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 1 171 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 DY276930|DY276930.1 IC0AAA42CA01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence. - 511 530 AGAGAAGCGTTTCAGTCTTTCAAGAAACAGCAGCCGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTATTGTGGAATCAATTATCAATTATATTTATGTGAAATAATTGAATGC 411 630 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 EY701822|EY701822.1 CS00-C3-700-012-H06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence. - 201 220 TTCAGTCTTTCAAGAAACAGCAGCCTCGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 101 320 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 EY737033|EY737033.1 CS00-C3-705-023-G03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence. - 264 283 AGCAGCCTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCGTGCTGAATCAATGGAGAAAAAGCATG 164 383 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 EY800485|EY800485.1 CR05-C3-701-097-E12-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence. - 229 248 TTCAGTCTTTCAAGAAACAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGGTGTATCTTTTCGGCTCCCTCTAACGCGCTAGGGACGCGACCCCCGGCCCGCTCCTCTCCCGGGAGGGCGGCCG 129 348 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 EY812575|EY812575.1 PT11-C1-900-027-H03-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence. - 308 327 AAAAACAGAGAAAAGTTTCAGTCTTTCAAGAAACAGCAGCCTTGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 208 427 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 EY823844|EY823844.1 PT11-C1-901-056-E02-CT.F Poncirus trifoliata leaf, infected with CTV Citrus trifoliata cDNA, mRNA sequence. - 300 319 AAAAACAGAGAAAAGTTTCAGTCTTTCTAGAAACAGCAGCCTTGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTGTTAGGGAGGGAGTCTCTGCATTCTGAATCAATGGAGAAAAAGCATG 200 419 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0 FC914810|FC914810.1 IC0AAA42CA01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42CA01, mRNA sequence. - 511 530 AGAGAAGCGTTTCAGTCTTTCAAGAAACAGCAGCCGAGAGAGAGAGAGAGAGAAATGGAAGGAAGAAAGCAAACAGGTTCCTCTTCTTCATTGACGAACGAGTTGTTCGGCTCCAAAGAATCTTCTTCCTCCTCTGGGATTTTCGGTTCTATCTTTTCGCCTCCCTCTAAGGTATTGTGGAATCAATTATCAATTATATTTATGTGAAATAATTGAATGC 411 630 AGTTGTTCGGCTCCAAAGAA AGTTGTTCGGCTCCAAAGAA |||||||||||||||||||| ==================== 20 0 0 0