# [ GGGenome | 2025-04-07 23:11:27 ] # database: DDBJ release 134.0 (Mar, 2024) # query: TTTTGCTGTTTTTAAGCATGGA # count: 21 # query: TCCATGCTTAAAAACAGCAAAA # count: 10 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins GP479853|GP479853.1 Sequence 10850 from patent US 7557201. + 424 445 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGGGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCG 324 463 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 BE054786|BE054786.2 GA__Ea0029O13f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0029O13f, mRNA sequence. + 444 465 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAAAAAAAAAAAAAAAAAAAA 344 497 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 BE055670|BE055670.2 GA__Ea0013G11f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0013G11f, mRNA sequence. + 208 229 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCGTTGTTTGTGCATCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTATTCTTGATATTAGTCTATAGTATACTGG 108 329 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 BF278253|BF278253.2 GA__Eb0032D10f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0032D10f, mRNA sequence. + 440 461 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCGTTGTTTGTGCATCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTAAAAAAAAAAAAAAAAAA 340 550 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 CO087768|CO087768.1 GR__Ea06G05.f GR__Ea Gossypium raimondii cDNA clone GR__Ea06G05 5', mRNA sequence. + 233 254 TGGCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTG 133 262 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 DR454655|DR454655.1 CM026A10 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 415 436 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGCACCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTATTCTTGATACTAGTCTATAGCATACTGG 315 536 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 ES812743|ES812743.1 UFL_305_34 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence. + 421 442 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGCAAAAAAAAAAAAAAAAAAA 321 489 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 EV487831|EV487831.1 128A04 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 417 438 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGCACCCCTTTGTTCAGCTGAATGTA 317 489 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 EV489059|EV489059.1 153H05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 419 440 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTAGTTTGTGCACCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTATTCTTGATACTAGTCTATAGCATACTGG 319 540 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 EX166014|EX166014.1 B11_P-20_092 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence. + 534 555 AATGTCTTTTGTTAATTTCTTCGGCTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGGTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGCAAAAAAAAAAAAAACTCCAGAGACTTCTAGAGGGCCGGGGCCCTCGATTTCCCCGGNGGGNCNGAGCCNNG 434 654 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 GR713205|GR713205.1 EST006405 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 31-K06 5', mRNA sequence. + 425 446 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATG 325 458 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 GR715637|GR715637.1 EST008837 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 40-F09 5', mRNA sequence. + 138 159 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGGGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCGTTGTTTGTGCAAAAA 38 192 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK796522|JK796522.1 F08-110F08 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 605 626 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGC 505 654 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK796859|JK796859.1 G09-062G9 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 605 626 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGC 505 654 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK797169|JK797169.1 B06-116B06 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 615 636 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGC 515 664 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK809422|JK809422.1 E07-GC11293 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 494 515 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGTGTTGTTTGTGC 394 543 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK810374|JK810374.1 A08-GC6497 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 441 462 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGGTGAAATATGAAACTCCATTTCAACATCATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTC 341 470 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK810545|JK810545.1 F09-GC4957 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 414 435 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGGGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATT 314 447 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 JK810660|JK810660.1 A02-GC0305 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence. + 400 421 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGGGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTG 300 429 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 CP032571|CP032571.1 Gossypium turneri isolate D10-2 chromosome D10_01. + 45097199 45097220 AATGTCTTTTGTTAATTTCTTCGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCGTTGTTTGTGCACCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTATTCTTGATACTAGTCTATAGTATACTGG 45097099 45097320 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 CP106687|CP106687.1 Gossypium herbaceum isolate Zhongcao1 chromosome 1. + 104391029 104391050 CGGTTTCAATAAAGTGATTGTGAAGGAAGATTGTAAGCATAATGAGATGAAATATGAAACTCCATTTCAACATTATGAAACTCCATTTCAACATGATTGTTTTTGCTGTTTTTAAGCATGGATTTTTCTGAATGAATGCGTTGTTTGTGCATCCCTTTGTTCAGCTGAATGTAGATTTAGGCTAAGTTGAAGTATTCTTGATATTAGTCTATAGTATACTGG 104390929 104391150 TTTTGCTGTTTTTAAGCATGGA TTTTGCTGTTTTTAAGCATGGA |||||||||||||||||||||| ====================== 22 0 0 0 OX578259|OX578259.1 Electrona antarctica genome assembly, chromosome: 14. - 12233157 12233178 AGGTAAAAACAGAGAGAATAAGAGACAACATAATACTTACGAAACACTTTTGACAATATTGATGATATGCAGTACTTGGGGAAAAACATAATAATAGAGATCCATGCTTAAAAACAGCAAAACGATGACAAATAATTGACAATTATAAATAATTGTCAGCTCTTATCCATTGTACCATGTGACTGTTCTCTTGACAATTAACCCTGCAATGCGCATAATTGC 12233057 12233278 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO095603|HO095603.1 rayctn0_0084_B11.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 14 35 CCGTTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATGATGTTGAAATGGAGTTTCATATTTCACCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCGAAGAAATTAACAAAAGACATT 1 135 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO098108|HO098108.1 rayctn0_0116_C08.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 29 50 GCACAAACAACACATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATGATGTTGAAATGGAGTTTCATATTTCACCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCGAAGAAATTAACAAAAGACATT 1 150 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO098443|HO098443.1 rayctn0_0120_D04.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 29 50 GCACAAACAACGCATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATCACGTTGAAATGGAGTTTCATAATGTTGAAATGGAGTTTCATATTTCATCCCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCG 1 150 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO100933|HO100933.1 rayctn0_0152_A10.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 29 50 GCACAAACAACGCATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATCATGTTGAAATGGAGTTTCATAATGTTGAAATGGAGTTTCATATTTCATCCCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCG 1 150 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO101466|HO101466.1 rayctn0_0158_F01.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 29 50 GCACAAACAACACATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATGATGTTGAAATGGAGTTTCATATTTCACCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCGAAAAAATTAACAAAAGACATT 1 150 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 HO108059|HO108059.1 rcrycc0_0019_C09.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence. - 29 50 GCACAAACAACACATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATGATGTTGAAATGGAGTTTCATATTTCACCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCGAAGAAATTAACAAAAGACATT 1 150 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 JZ117718|JZ117718.1 G04_51611.76.S1108242767.LDYN1-8140.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence. - 79 100 CAAGAATACTTCAACTTAGCCTAAATCTACATTCAGCTGAACAAAGGGGTGCACAAACAACACATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATGATGTTGAAATGGAGTTTCATATTTCACCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCGAAGAAATTAACAAAAGACATT 1 200 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 CP032553|CP032553.1 Gossypium raimondii isolate D5-4 chromosome D5_01. - 15190776 15190797 CCAGTATGCTATAGACTAGTATCAAGAATACTTCAACTTAGCCTAAATCTACATTCAGCTGAACAAAGGGGTGCACAAACAACACATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATCATGTTGAAATGGAGTTTCATATTTCATCTCATTATGCTTACAATCTTTTCCTTCACAATCACTTTATTGAAACCGAAGAAATTAACAAAAGCCA 15190676 15190897 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0 CP106699|CP106699.1 Gossypium herbaceum isolate GPA1alz chromosome 1. - 21268323 21268344 CCAGTATACTATAGACTAATATCAAGAATACTTCAACTTAGCCTAAATCTACATTCAGCTGAACAAAGGGATGCACAAACAACGCATTCATTCAGAAAAATCCATGCTTAAAAACAGCAAAAACAATCATGTTGAAATGGAGTTTCATAATGTTGAAATGGAGTTTCATATTTCATCTCATTATGCTTACAATCTTCCTTCACAATCACTTTATTGAAACCG 21268223 21268444 TCCATGCTTAAAAACAGCAAAA TCCATGCTTAAAAACAGCAAAA |||||||||||||||||||||| ====================== 22 0 0 0