# [ GGGenome | 2025-04-04 23:53:01 ] # database: DDBJ release 134.0 (Mar, 2024) # query: taatcttcagggaccagatacaca # count: 4 # query: tgtgtatctggtccctgaagatta # count: 25 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins AM788966|AM788966.1 Nicotiana tabacum EST, clone nt006119070. + 337 360 TTTCTGCAAATCGGATACAAGATTTGAGGCTCCAAAAGCAGCAGAGCCACCAACAACAGAAAGTAGAGCAACCACAACCTGCAAACCAATTTGCCAAGGGTAATCTTCAGGGACCAGATACACACAAGCAGGACCAAAAACCAACAATCCCAAGCTCAAGCTAAATAGTACTGATGGGGTGCCAGGGTCAGTAGCCGCAGAAAGAATCCCAAACTCTTCAGCTT 237 460 TAATCTTCAGGGACCAGATACACA TAATCTTCAGGGACCAGATACACA |||||||||||||||||||||||| ======================== 24 0 0 0 ET752414|ET752414.1 CHO_OF311xp21r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence. + 127 150 TTTCTGCAAATCGGATACAAGATTTGAGGCTCCAAAAGCAGCAGAGCCACCAACAACAGAAAGTAGAGCAACCACAACCTGCAAACCAATTTGCCAAGGGTAATCTTCAGGGACCAGATACACACAAGCAGGACCAAGAACCAACAATCCCAAGCTCAAGCTAAATAGTACTGATGGGGTTCCAGGGTCAGTAGCTGCAGAAAGAATCCCAAACTCTTCAGCTT 27 250 TAATCTTCAGGGACCAGATACACA TAATCTTCAGGGACCAGATACACA |||||||||||||||||||||||| ======================== 24 0 0 0 FI071632|FI071632.1 CHO_OF7325xc05f1.ab1 CHO_OF7 Nicotiana tabacum genomic 5', genomic survey sequence. + 420 443 TTTCTGCAAATCGGATACAAGATTTGAGGCTCCAAAAGCAGCAGAGCCACCAACAACAGAAAGTAGAGCAACCACAACCTGCAAACCAATTTGCCAAGGGTAATCTTCAGGGACCAGATACACACAAGCAGGACCAAGAACCAACAATCCCAAGCTCAAGCTAAATAGTACTGATGGGGTTCCAGGGTCAGTAGCTGCAGAAAGAATCCCAAACTCTTCAGCTT 320 543 TAATCTTCAGGGACCAGATACACA TAATCTTCAGGGACCAGATACACA |||||||||||||||||||||||| ======================== 24 0 0 0 AP026698|AP026698.1 Capsicum annuum Takanotsume DNA, chromosome 3, sequence. + 277192029 277192052 TCTCTGCAAAGTGGAAACAAGGTTTGAGGCTCCAAAAGCAGCGGAGCCACCAACAACAGAAAGCAAAGCAACCACAACTTGCAAAGCAATTTGCCAAGGGTAATCTTCAGGGACCAGATACACACAAGCAGGGCCAACAACCAGCAATGCCAAGCTCAAACTGAAGAGTGCAGATGGTGTTGAAGGGTCAGTAGCTGCTGAAAGAATCCCCGATTCTTCGGCTT 277191929 277192152 TAATCTTCAGGGACCAGATACACA TAATCTTCAGGGACCAGATACACA |||||||||||||||||||||||| ======================== 24 0 0 0 LG144796|LG144796.1 KR 1020160038243-A/89: Single nucleotide polymorphism marker set for marker-assisted breeding in Capsicum and uses thereof. - 82 105 TCTTTCAGCAGCTACTGACCCTTCAACACCATCTGCACTCTTCAGTTTGAGCTTGGCATTGCTGGTTGTTGGCCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCT 1 121 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 AM817544|AM817544.1 Nicotiana tabacum EST, clone nt006073014. - 353 376 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 253 476 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 BM064979|BM064979.1 KS01073E06 KS01 Capsicum annuum cDNA, mRNA sequence. - 397 420 AAGCCGAAGAATCGGGGATTCTTTCAGCAGCTACTGACCCTTCAACACCATCTGCACTCTTCAGTTTGAGCTTGGCATTACTGGTTGTTGGCCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGTTGCTTTGCTTTCTGTTGTTGGTGGCTCCGCTGCTTTTGGAGCCTCAAACCTTGTTTCCACTTTGCAGAGA 297 520 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 CB185082|CB185082.1 KS04199T70 KS04 Capsicum chinense cDNA, mRNA sequence. - 340 363 AAGCCGAAGAATCGGGGATTCTTTCAGCAGCTACTGACCCTTCAACACCATCTGCACTCTTCAGTTTGAGCTTGGCATTGCTGGTTGTTGGCCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGTTGCTTTGCTTTCTGTTGTTGGTGGCTCCGCTGCTTTTGGAGCCTCAAACCTTGTTTCCACTTTGCAGAGA 240 463 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 DV160939|DV160939.1 KP1B.104K06F.050725T7 KP1B Nicotiana tabacum cDNA clone KP1B.104K06, mRNA sequence. - 441 464 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 341 564 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 DW000883|DW000883.1 KL4B.109E02F.051106T7 KL4B Nicotiana tabacum cDNA clone KL4B.109E02, mRNA sequence. - 484 507 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCAATTTGCAGAAA 384 607 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB432596|EB432596.1 KL5B.118E12F.060217T7 KL5B Nicotiana tabacum cDNA clone KL5B.118E12, mRNA sequence. - 447 470 AAGCTGAAGAGTTTGGGATTCTTTCTACAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 347 570 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB436289|EB436289.1 BL12.100O08F.060308T7 BL12 Nicotiana tabacum cDNA clone BL12.100O08, mRNA sequence. - 37 60 CCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 1 160 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB439563|EB439563.1 KN6B.103N22F.060103T7 KN6B Nicotiana tabacum cDNA clone KN6B.103N22, mRNA sequence. - 488 511 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 388 611 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB679969|EB679969.1 KL4B.102L24F.051125T7 KL4B Nicotiana tabacum cDNA clone KL4B.102L24, mRNA sequence. - 495 518 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 395 618 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB680815|EB680815.1 KL4B.111H09F.060128T7 KL4B Nicotiana tabacum cDNA clone KL4B.111H09, mRNA sequence. - 487 510 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCCGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 387 610 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 EB681205|EB681205.1 KL4B.112L09F.060131T7 KL4B Nicotiana tabacum cDNA clone KL4B.112L09, mRNA sequence. - 487 510 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 387 610 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 FG641877|FG641877.1 TT-05_A15 K326 early senescent leaf library Nicotiana tabacum cDNA, mRNA sequence. - 405 428 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 305 528 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 FS387471|FS387471.1 Nicotiana tabacum cDNA, clone: TBK01A01NGRL0041_4_B08, 5'-end sequence. - 449 472 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGGGCCTCAAATCTTGTATCCGATTTGCAGAAA 349 572 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 FS413971|FS413971.1 Nicotiana tabacum cDNA, clone: TBK02GR0036_3_H12, 5'-end sequence. - 449 472 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTAGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 349 572 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 FS427187|FS427187.1 Nicotiana tabacum cDNA, clone: TBK02GR0073_1_G06, 5'-end sequence. - 399 422 AAGCTGAAGAGTTTGGGATTCTTTCTGGAGGTACTGAGCCTGGGAACCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGGTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGGAAATTGGGTTGCAGGTTGTGGGTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 299 522 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 FS432412|FS432412.1 Nicotiana tabacum cDNA, clone: TBK02GR0087_3_H02, 5'-end sequence. - 496 519 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTTGCAGGTTGTGGTTGCTCTGCT 396 559 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 JZ951484|JZ951484.1 NSYL11159 Nicotiana sylvestris normalized full-length cDNA Library Nicotiana sylvestris cDNA 5', mRNA sequence. - 394 417 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 294 517 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 JZ961634|JZ961634.1 NTOM4437 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence. - 471 494 AAGCTGAAGAGTTTGGGTTTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCGCTGTTTAGCCTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTGCTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTTTCCAATTTGCAGAAA 371 594 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 JW088780|JW088780.1 TSA: Capsicum annuum MGMT_Contig38536 mRNA sequence. - 580 603 AAGCCGAAGAATCGGGGATTCTTTCAGCAGCTACTGACCCTTCAACACCATCTGCACTCTTCAGTTTGAGCTTGGCATTGCTGGTTGTTGGCCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGTTGCTTTGCTTTCTGTTGTTGGTGGCTCCGCTGCTTTTGGAGCCTCAAACCTTGTTTCCACTTTGCAGAGA 480 703 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 KA737000|KA737000.1 TSA: Nicotiana benthamiana isotig00744.Nb_leaf mRNA sequence. - 1354 1377 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCACTATTTAGCCTGAGCTTGGGTTTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTATCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTCGGAGCCTCAAATCTTGTATCCGATTTGCAGAAG 1254 1477 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 KA737001|KA737001.1 TSA: Nicotiana benthamiana isotig00745.Nb_leaf mRNA sequence. - 1353 1376 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCTGCACTATTTAGCCTGAGCTTGGGTTTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTATCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTCGGAGCCTCAAATCTTGTATCCGATTTGCAGAAG 1253 1476 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 ET752350|ET752350.1 CHO_OF311xp21f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence. - 503 526 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGGTTTGCAGGTTGTGGTTGCTCTACTTTCTGTTGTTGGTGGCTCTGCTGCTTTTGGAGCCTCAAATCTTGTATCCGATTTGCAGAAA 403 626 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 ET818644|ET818644.1 CHO_OF729xg06r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence. - 369 392 AAGCTGAAGAGTTTGGGATTCTTTCTGCAGCTACTGACCCTGGAACCCCATCAGTACTATTTAGCTTGAGCTTGGGATTGTTGGTTCTTGGTCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGGAAATTG 269 406 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0 CP124729|CP124729.1 Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3. - 14591689 14591712 AAGCCGAAGAATCGGGGATTCTTTCAGCAGCTACTGACCCTTCAACACCATCTGCACTCTTCAGTTTGAGCTTGGCATTACTGGTTGTTGGCCCTGCTTGTGTGTATCTGGTCCCTGAAGATTACCCTTGGCAAATTGCTTTGCAAGTTGTGGTTGCTTTGCTTTCTGTTGTTGGTGGCTCCGCTGCTTTTGGAGCCTCAAACCTTGTTTCCACTTTGCAGAGA 14591589 14591812 TGTGTATCTGGTCCCTGAAGATTA TGTGTATCTGGTCCCTGAAGATTA |||||||||||||||||||||||| ======================== 24 0 0 0