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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-04-25 18:52:08, GGGenome : DDBJ release 125.0, ENV division (Dec, 2021)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Candidatus Brocadia pituitae DNA, complete genome.
AP021856.1:2668524-2668538
ATATTCTTTGCCAGGATTAACAGGAACGAT2668524TTCATTGACAACATTTATACATTCATTACCTGGTTAAGCACGGCT
Saprospiraceae bacterium isolate SSA7 chromosome.
CP058702.1:1416200-1416214
TTCCTTTTTGAGGTAAATCTCAGCAATACT1416200TTCATTGACAACATTCACTTNTTTGATATCACCTGCTTCTGTGTA
Rhodobacteraceae bacterium isolate SSD4 chromosome, complete genome.
CP059263.1:1442910-1442924
TGGTGATGACCCGTCTCGGTCAGCTTCGGT1442910TTCATTGACAACATTTCCTTTCAACAAAAATAAAAAATCCCGCCT
Bacterium isolate Aved_18-Q3-R54-62_BAT3C.16_uni chromosome, complete genome.
CP064960.1:1186415-1186429
TTCCGCGATCAAGGCCGTGATGTTTTGCTC1186415TTCATTGACAACATTTTCCGCTTTACCCAGGCGGGCTCGGAAGTG
Dehalococcoidia bacterium isolate bin423 chromosome.
CP070729.1:1158274-1158288
TTCTACTTTTATTAATCTCTCCTTTTCATC1158274TTCATTGACAACATTGTAGCAATCACGACGGTGCACAGTTATTCC
Planctomycetes bacterium isolate bin1080 chromosome.
CP070830.1:1864778-1864792
AGCGCTTTTGCCCTTCCGTATCGCTGTAAC1864778TTCATTGACAACATTTACAAAACCCGTCTCCGGCTCGACAACAAC
Uncultured Flavobacteriia bacterium.
FO117603.1:16462-16476
AGTTAATGGCATTGGTTACTGGGTTAATAT16462TTCATTGACAACATTCTCACAAATACCTGATAATGAGAATATAAA
Uncultured bacterium clone VISS18_097 genomic sequence.
KX158548.1:16462-16476
AGTTAATGGCATTGGTTACTGGGTTAATAT16462TTCATTGACAACATTCTCACAAATACCTGATAATGAGAATATAAA
Homavirus sp. clone Homavirus_44 genomic sequence.
MK072375.1:2043-2057
ACGATTAGGTGCGGCATTAAGAAAAAACAG2043TTCATTGACAACATTGGATTTGGAAGATAATTACTTCAATAGTGA
Siphoviridae sp. isolate 87, complete genome.
MN855792.1:19506-19520
CTTTCCGGGCAAGACTTTACTAAGCTTGAC19506TTCATTGACAACATTGAAGCCGCTTTTGTTGATTCCGATTCGGAT
Sphingobacteriales bacterium isolate Kalu_18-Q3-R12-55_MAXAC.067_cln chromosome, complete genome.
CP064999.1:2536900-2536914
GAAGATTTACCCATTTTAAATGAGTTGGGT2536900AATGTTGTCAATGAAAACACAGCCACCCGTCGGGATTTTCTAAAA
Thermoplasmata archaeon isolate bin983 chromosome.
CP070629.1:1625417-1625431
TATACCTTCGGGGGCGTGGGTTCCGGCGGG1625417AATGTTGTCAATGAATTATACGAGTATAATCCCGCAATGGATACC
Dehalococcoidia bacterium isolate bin708 chromosome.
CP070676.1:1163898-1163912
GGAATAACTGTTCACCGCCGCGATTGCTAC1163898AATGTTGTCAATGAAGAGGAAAAGGAGAGGCTGATAAAAGTGGAG
Candidatus Heimdallarchaeota archaeon isolate bin6 chromosome.
CP070695.1:309616-309630
CGGATCAAATATTTTTTTTTTCAGCTACAA309616AATGTTGTCAATGAATTATTACAATTTTCTCAGCTTTCGTATAAC
Candidatus Bathyarchaeota archaeon isolate bin519 chromosome.
CP070709.1:1115267-1115281
GCAAACTTGCATATTCCCCTCACAAAAAAC1115267AATGTTGTCAATGAACCGCGTTATTTAAACATTTCTTTTGGTGCT
Nitrospiraceae bacterium isolate bin398 chromosome.
CP070737.1:452733-452747
ATTGAAGTTCTGTACAGCCCTTATCCTGAC452733AATGTTGTCAATGAATTTTGAGACTTTTGCCTGATCCTGTTCATC
Uncultured stramenopile clone AA3F14RJ1F12 18S ribosomal RNA gene, partial sequence.
GU823247.1:964-978
GTTAACGAACGAGACCTTAGCCTGCTAAAT964AATGTTGTCAATGAATATTCATTGGCAGCGTTTCTTAGAGGGACA
Uncultured marine thaumarchaeote KM3_70_D07 genomic sequence.
KF901029.1:9827-9841
TGACCACGTGGGCTCACAACGCTTGCAAGA9827AATGTTGTCAATGAACCACTTCCAGTACCAATTTCAACAATTTTT
Saccharomyces kudriavzevii genome assembly, chromosome: 10.
LR215944.1:468222-468236
TGGTTACTTAATAAGTCATTTTGCTGTAGC468222AATGTTGTCAATGAAGTAAGTTCCGCAAGTAAAGTGGTGTTGAAA
Fisa-like virus clone V17D19D1 polyprotein gene, partial cds.
MG571973.1:1051-1065
CCCCTYGAACGAACAAAGGAATATTATGAG1051AATGTTGTCAATGAAGTTCTCTGTCGTGATCAGGAGCATGTCACT
Viral metagenome isolate GVMAG-M-3300023184-16 genomic sequence.
MN740015.1:212242-212256
GTTACCCTTTTTGAAAATTTGCACATCCAA212242AATGTTGTCAATGAATCGCATTTGTTGTAATATTTTTTCAATATG
Astroviridae sp. isolate tom152ast2, complete genome.
MN920667.1:3801-3815
TCTGGGCAATATTCGACAACTGTAGATAAC3801AATGTTGTCAATGAATGGTTAACAGCGTATGAGTTTGGCTATCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/ddbj125env/TTCATTGACAACATT
lang : en | db : ddbj125env | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.130 | 0.122 | search_plus_done; http://172.18.8.78:27712/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.088 | search_minus_done; http://172.18.8.78:27712/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=40
0.226 | 0.008 | cgi_end;

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