# [ GGGenome | 2024-11-24 22:16:59 ] # database: DDBJ release 134.0, VRL division (Mar, 2024) # query: TTCATTGACAACATT # count: 5 # query: AATGTTGTCAATGAA # count: 28 # name strand start end snippet snippet_pos snippet_end query sbjct align edit match mis del ins JN798586|JN798586.1 Human rhinovirus A strain HRV-A80_p1138_sR1041_2009 polyprotein gene, partial cds. + 3474 3488 TGATCATGTTGCCTTCATAGACCTAAGGGACTTCCAGTGTGCAGAAGAACAGGGTGTGACTGATTATATCCATACACTAGGTGAAGCATTTGGTGCTGGCTTCATTGACAACATTAAAGACCAGATCCAATCTATTAACCCCATAAACAAAATCACTAGTAAGATTGTCAAGTGGTTAATTAGAATTATATCAGCTGTCACAATTATAGTCAGAA 3374 3588 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 JN990705|JN990705.1 Human rhinovirus A strain HRV-A80_p1187_sR2954_2009 polyprotein gene, partial cds. + 3664 3678 TGATCATGTTGCCTTCATAGACCTAAGGGACTTCCAGTGTGCAGAAGAACAGGGTGTGACTGATTATATCCATACACTAGGTGAAGCATTTGGTGCTGGCTTCATTGACAACATTAAAGACCAGATCCAATCTATTAACCCCATAAACAAAATCACTAGTAAGATTGTCAAGTGGTTAATTAGAATTATATCAGCTGTCACAATTATAGTCAGAA 3564 3778 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 KX857216|KX857216.1 Shearwaterpox virus strain SWPV-1, complete genome. + 82880 82894 CCCGAATACGTTTAATTTATCAAATAAGATCATATTTTTTTTTAATGAATCTTCTTTTAAGAATCTAGTAAAAGAATACTCTTTTTTTATATTATATACTTTCATTGACAACATTTATTAGTGATGTATAGTATTTATATTTTTATCAGTTAATTTAGTACAGTAGTTTATAAAAATCATGAAAAAATACTTTCTATACAGTGATAATTATAAGA 82780 82994 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 LC699423|LC699423.1 Rhinovirus A80 HRV_A80_Fukushima_OR65_2020 genomic RNA, nearly complete genome. + 3678 3692 TGATCATGTTGCTTTTATAGACTTAAGAGACTTCCAGTGTGCAGAAGAGCAGGGTGTGACTGACTATATCCACTCACTAGGTGAGGCATTTGGTGCTGGTTTCATTGACAACATTAAAGATCAGATTCAATCTATTAACCCTATAAACAAAGTTACTAGTAAGATTATTAAGTGGTTAATCAGAATTATATCAGCTGTTACAATCATAGTCAGAA 3578 3792 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 LS484712|LS484712.1 Daphnia iridovirus 1 genome assembly, chromosome: 1. + 126022 126036 TTGGACGACCCATTTGACTTCAGAGATTCATGAAAACCATGTTTCATTGAACATGTTAAAATTTCATCCCTTATTTTGGGATTTGGAAAAATCATTGAGTTTCATTGACAACATTGGACCCCTGTGTCTTGAAGACATAAACGTTTTTCAAGGAATGAGTGTTGGAGAAACACGAAACATGAAAAAATTCAGTTTTTTGCAAGACAAGTCAATTG 125922 126136 TTCATTGACAACATT TTCATTGACAACATT ||||||||||||||| =============== 15 0 0 0 CY099868|CY099868.1 Influenza B virus (B/Georgia/NHRC0001/2001) nucleoprotein (NP) gene, complete cds. - 1475 1489 GGAACGAAGTAGGTGGAGACGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAAAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGACGTGATGCAGATGTCAAAGGAAACCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1375 1589 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 CY155549|CY155549.1 Influenza B virus (B/Brisbane/32/2005) nucleoprotein (NP) gene, complete cds. - 1477 1491 GGAACGAAGTAGGTGGAGACGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAAAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGACGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1377 1591 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 CY191374|CY191374.1 Influenza B virus (B/New York/WC-LVD-13-002/2013) nucleoprotein (NP) gene, complete cds. - 1486 1500 GGAACGAAGCAGGCGGAGACGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAAAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGACGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1386 1600 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 CY237367|CY237367.1 Influenza B virus (B/Connecticut/31/2017) nucleoprotein (NP) gene, complete cds. - 1495 1509 GGAACGAAGTAGGTGGAGATGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAGAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGGCGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1395 1609 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 EF434380|EF434380.1 Bat coronavirus Anhui/911/2005 nonfunctional spike protein (S) gene, complete sequence. - 3112 3126 AATGGGTAACATTACTGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAATCATTGAACACCATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCTATTTCTTCTTCTATAGAAGATCTTTATAATAGACTTGATACTTTGG 3012 3226 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 EU420138|EU420138.1 Miniopterus bat coronavirus 1, complete genome. - 24179 24193 AATGGGTAATATTACAGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCCCAGTCATTGAATACCATTTCCCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTGTATAATAGGCTTGATACTTTGG 24079 24293 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 JX463337|JX463337.1 Tobacco streak virus isolate 2334 segment RNA 1, complete sequence. - 1439 1453 GCGTTACAAAATGATTGCCCCTGGTATTGATGCTGTAAAAACAAGAACCGAGAAAAACGTTGACATCCTCGATGAGAAAGGTCTTATCAAGGAAGACTTTAATGTTGTCAATGAATTACTCGAAGAAGCCGGGTTAATAGAACCCAAGTTGCCCCACTTTACGGATGTCATTAAGAACGCAGGACTCCGAAGTTTTGGGAAGAAAACCATCGAAA 1339 1553 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KJ473795|KJ473795.1 BtMf-AlphaCoV/AH2011, complete genome. - 24177 24191 AATGGGTAATATTACAGTTGCTTTTAGTGGTGTAAGCAATGCCATTCAACAAACAGCTCAGTCATTGAACACCATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCCCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTGTATAATAGGCTTGATACTTTGG 24077 24291 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KJ473796|KJ473796.1 BtMf-AlphaCoV/JX2012, complete genome. - 24181 24195 AATGGGTAACATTACAGTTGCTTTTAGTGGTGTGAGTAATGCCATTCAACAAACAGCCCAGTCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAAAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGGCTTGACACTTTGG 24081 24295 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KJ473801|KJ473801.1 BtMf-AlphaCoV/GD2012-a spike glycoprotein gene, complete cds. - 8471 8485 AATGGGTAATATTACTGTTGCTTTTAGTGGTGTGAGTAATGCCATTCAACAAACAGCTCAATCATTGAACACCATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCCTCTTCTATAGAAGATCTGTATAATAGGCTTGATACTTTGG 8371 8585 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KJ473803|KJ473803.1 BtMf-AlphaCoV/HuB2013-a spike glycoprotein gene, complete cds. - 8726 8740 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAATCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGACTTGATACTTTGG 8626 8840 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KP256522|KP256522.1 Tobacco streak virus isolate OK segment RNA 1 replicase gene, complete cds. - 1418 1432 GCGTCACAAAATGATTGCCCCTGGTATAGATGCGGTCAAGACACGCACCGAGAAAAACATTGATAGGCTTGATGACAAAGGTCTTGTCAAGGAAGACTTTAATGTTGTCAATGAATTACTCGAAGATGCTGGTCTCGTTGGTGTGAATTTACCACACTTAAGAGACGTCTTGAAATCTGCAGGACTTCGAAGTTTCGGTAAGAAAACTATCGAAA 1318 1532 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KT853530|KT853530.1 Influenza B virus (B/Hawaii/35/2014) segment 5 nucleoprotein (NP) gene, complete cds. - 1449 1463 GGAACGAAGCAGGTGGAGACGGAGGGTCTGGCCAAATAAGCTGCAGTCCAGTGTTTGCAGTGGAAAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGACGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1349 1563 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KT894879|KT894879.1 Astrovirus BatAstV M.bech/GER isolate B6 RNA-dependent RNA polymerase (RdRp) gene, partial cds. - 179 193 ACACTGTTTGTTACACCGTTATACAGTATTTCCAACTGGAGAAGTAACACTCATCCGGAAAGGCAATCCTTCTGGACAATATTCGACAACTGTTGATAACAATGTTGTCAATGAATGGCTAACAGCATATGAGTTTGGCTATTTGTACAGGAAGCAGCATGGTAAGCTCCCCGAAGTAAAGGAATACCGCAGAAATGTAGATATGCTGTGTTATG 79 293 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KY783846|KY783846.1 Bat coronavirus isolate 160185 spike glycoprotein gene, complete cds. - 3112 3126 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCTATTCAACAAACAGCTCAGTCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCTATTTCTTCTTCTATAGAAGATCTTTATAATAGGCTTGATACTTTGG 3012 3226 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KY783847|KY783847.1 Bat coronavirus isolate 160188 spike glycoprotein gene, complete cds. - 3109 3123 AATGGGTAACATCACTGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAGTCGTTGAACACCATTTCTCAAGCTCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTGTATAACAGGCTTGACATTTTGG 3009 3223 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KY783848|KY783848.1 Bat coronavirus isolate 160201 spike glycoprotein gene, complete cds. - 3112 3126 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAGTCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAGGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGGCTTGATACTTTGG 3012 3226 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 KY783850|KY783850.1 Bat coronavirus isolate 160224 spike glycoprotein gene, complete cds. - 3109 3123 AATGGGTAACATCACTATTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAATCATTGAACACCATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAGGCCATTTCTTCTTCTATAGAGGATCTTTATAATAGGCTTGATACTTTGG 3009 3223 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 MH394321|MH394321.1 Cryptophlebia peltastica nucleopolyhedrovirus, complete genome. - 86144 86158 ACTTGAAAATCTATGTTGGAGTTGCGAGAAAAACGTGTATTCGGTTCATCGACTCAAAGATTGCGACAGCTGCACCGAAGTTGTGTTTCAACTTTACGAAAATGTTGTCAATGAAGGCGCCATTTCTGTAACTCTATAGTTTTAAGAATAAACATTATGAACGAATTTAGTGTTTTTATTTTCGCTGTACTAGTGTCTTTGTTCATAGTTTTCCT 86044 86258 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 MH584441|MH584441.1 Influenza B virus (B/Kentucky/22/2018) segment 5 nucleoprotein (NP) gene, complete cds. - 1495 1509 GAAACGAAGTAGGTGGAGATGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAGAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGGCGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1395 1609 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 MK676319|MK676319.1 Influenza B virus (B/Wisconsin/06/2019) segment 5 nucleoprotein (NP) gene, complete cds. - 1495 1509 GGAACGAAGTAGGTGGAGACGGAGGGTCTGGCCAAATAAGCTGCAGCCCAGTGTTTGCAGTGGAGAGACCTATTGCTCTAAGCAAGCAAGCTGTAAGAAGAATGTTGTCAATGAATATTGAGGGGCGTGATGCAGATGTCAAAGGAAATCTACTCAAGATGATGAATGACTCAATGGCTAAGAAAACCAGTGGAAATGCTTTCATTGGGAAGAAA 1395 1609 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 MN611524|MN611524.1 Miniopterus schreibersii bat coronavirus 1-related isolate 161454, complete genome. - 24172 24186 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAGTCATTGAACACCATTTCTCAAGCTCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCCAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGACTTGATACTTTGG 24072 24286 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OL956935|OL956935.1 Bat alphacoronavirus isolate batCoV/MinFul/2018/SriLanka, complete genome. - 23990 24004 TATGGGAAACATTACTATTGCATTTGGTGGTGTTAGTAATGCCATTCAACAAACAGTTAATTCATTGAACACAGTTGCCAAAGCCCTTAACAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACTAAGCAACTTGCTTCTAACTTTCAAGCCATTTCATCTTCTATTGAGGATTTGTATAATCGGCTTGATTCATTAG 23890 24104 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OQ175083|OQ175083.1 Bat Coronavirus MsGD16 isolate BtMs-AlphaCoV/GD2016-Q63, complete genome. - 24181 24195 AATGGGTAACATTACAGTTGCTTTTAGTGGTGTGAGTAATGCCATTCAACAAACAGCCCAGTCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAAAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGGCTTGACACTTTGG 24081 24295 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OQ175084|OQ175084.1 Bat Coronavirus MsGD16 isolate BtMs-AlphaCoV/GD2016-Q64, complete genome. - 24173 24187 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCTATTCAACAAACAGCTCAGTCATTGAACACTATTTCTCAAGCCCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCTATTTCTTCTTCTATAGAAGATCTTTATAATAGGCTTGATACTTTGG 24073 24287 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OQ175085|OQ175085.1 Bat Coronavirus MsYN20 isolate BtMs-AlphaCoV/YN2020-Q65, complete genome. - 24179 24193 AATGGGTAACATTTCAGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAGTCATTGAACACCATTTCTCAAGCTCTTAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCCAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTTTATAATAGACTTGATACTTTGG 24079 24293 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OQ175086|OQ175086.1 Bat Coronavirus MsYN20 isolate BtMs-AlphaCoV/YN2020-Q66, complete genome. - 24179 24193 AATGGGTAACATCACTGTTGCTTTTAGTGGTGTAAGTAATGCCATTCAACAAACAGCTCAGTCGTTGAACACCATTTCTCAAGCTCTAAATAAGGTTGAGAATGTTGTCAATGAACAAGGAACTGCTTTGTCTCAGTTAACCAAGCAACTTGCTTCTAATTTTCAAGCCATTTCTTCTTCTATAGAAGATCTGTATAATAGGCTTGATACTTTGG 24079 24293 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0 OR082769|OR082769.1 Tobacco streak virus isolate DSMZ PV-0909 segment RNA1, partial sequence. - 1439 1453 GCGTTACAAAATGATTGCCCCTGGTATCGATGCTGTGAAAACGAGAACCGAGAAGAACGTTGACGTTCTCGATGAGAGAGGTCTTGTCAAGGAAGACTTTAATGTTGTCAATGAACTGCTCGAAGAAGCTGGGTTAGTAGAACCCAAGTTGCCCCGTTTTACGGATGTCATTAAGAACGCGGGACTCCGAAGTTTTGGGAAGAAAACCATCGAAA 1339 1553 AATGTTGTCAATGAA AATGTTGTCAATGAA ||||||||||||||| =============== 15 0 0 0