GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2021-09-17 01:19:30, GGGenome : Drosophila melanogaster genome, BDGP R5/dm3 (Apr, 2006)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

chr3L:16092264-16092278
CGCGACGTGGACGGGCAGGATGTGCTGCTC16092264TTCATTGACAACATTTTCCGTTTCACCCAGGCGGGATCGGAGGTG
chr3R:26821500-26821514
TGTTGCGGTGCGCGTACGTGGCGTATACGC26821500AATGTTGTCAATGAACCTGCACGGATTATTGGCATTAAGTAAGCC
chrX:1041153-1041167
CTCTTTAAAATCCCATTAATCCTCTTATTA1041153AATGTTGTCAATGAACGGCTCTTTAGGCTTGATAGATTATTTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : http://gggenome.dbcls.jp/dm3/TTCATTGACAACATT
lang : en | db : dm3 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.007 | 0.007 | search_start;
0.081 | 0.073 | search_plus_done; http://172.18.8.76:28099/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.004 | search_minus_done; http://172.18.8.76:28099/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.085 | 0.000 | cgi_end;

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