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2025-04-09 11:02:20, GGGenome : Zea mays genome, AGPv3 (Apr, 2013)
Summary:
Results:
検索語に色がつきます(ミスマッチ ・挿入 欠失) 。
検索結果のうち50件までを表示しています。
1 dna:chromosome chromosome:AGPv3:1:1:301476924:1
position: 111664097-111664111
ATGCCCAAACTGGACAGGTTTGTGGTAGTG111664097 TTCATTGACAACATT CTAATATATTCCAAGAATAAAGAAGAGCAT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 15038754-15038768
CTTCCTTTTAGAAACAGGTCTACGCGAACT15038754 TTCATTGACAACATT TGCATATATATATATATATATATATTCATT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 125864327-125864341
ATGCCAGAGCTGGACAAGTTTGTGGTGGTT125864327 TTCATTGACAACATT CTGGTTTATTCCAAAAATGAAGCTGAGCAT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 130414964-130414978
ATGGAATATCTTGATAAGTTTGTTGTGGTA130414964 TTCATTGACAACATT CTGATCTATTCCAAAAATGATGGAGAAAAT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 185574206-185574220
AGCATTTAAAGCATGATAAATTGTAGAAGG185574206 TTCATTGACAACATT TCTCCTAGGCATATGAACAACATTTCTACC
3 dna:chromosome chromosome:AGPv3:3:1:232245527:1
position: 105794437-105794451
ATGCCCGAGTTGGATAAATTTGTGGTGGTC105794437 TTCATTGACAACATT CTGATCTATTCCAAAGATGAAGAGGAGCAT
3 dna:chromosome chromosome:AGPv3:3:1:232245527:1
position: 194908102-194908116
CTCGACACCCCTGTCAATGTGAGGGAGGTC194908102 TTCATTGACAACATT TCTCACATACATCATTATCGGGACAATATT
3 dna:chromosome chromosome:AGPv3:3:1:232245527:1
position: 199882103-199882117
AGCATTTAAAGCATGATAAATTGTAGAAGG199882103 TTCATTGACAACATT TCTCCTAGGCATATGAACAACATTTCTACC
4 dna:chromosome chromosome:AGPv3:4:1:242062272:1
position: 50600960-50600974
TTTTTACTACACCAGTTGTAGATTGATCGA50600960 TTCATTGACAACATT GGCTGTCATTGTAAAAGGGCAAAGCAGTAG
4 dna:chromosome chromosome:AGPv3:4:1:242062272:1
position: 224402030-224402044
ATGGAATTTCTTGATAAGTTCATCGTGGTA224402030 TTCATTGACAACATT CTGGTTTATTCCAAGTATGATGGAGAACAT
5 dna:chromosome chromosome:AGPv3:5:1:217959525:1
position: 44940309-44940323
ATGGAAGAGCTGGATAAGTTTGTCGTAGTC44940309 TTCATTGACAACATT CTTATCTACTCCAAGAACCGCGAAGACCAT
7 dna:chromosome chromosome:AGPv3:7:1:176826311:1
position: 45912776-45912790
ATGGAAGAGTTAGATAAGTTTGTCGTAGTC45912776 TTCATTGACAACATT CTCATCTACTCCAAGAGTCAACAGGAGCAT
7 dna:chromosome chromosome:AGPv3:7:1:176826311:1
position: 124791033-124791047
CCTAATAGCAAATTCCGTGTTCCACATCAT124791033 TTCATTGACAACATT CATCAACTCTTGAATGGAAGCCTTCTCTCT
7 dna:chromosome chromosome:AGPv3:7:1:176826311:1
position: 169549472-169549486
AGCATTTAAAGCATGATAAATTGTAGAAGG169549472 TTCATTGACAACATT TCTCCTAGGCATATGAACAAACATTTCTAC
9 dna:chromosome chromosome:AGPv3:9:1:157038028:1
position: 73016418-73016432
ATGCCCGAGTTGGATAAATTTATGGTGGTC73016418 TTCATTGACAACATT TTGATCTATTCCAAAAAGTAAGAGGAGCAT
10 dna:chromosome chromosome:AGPv3:10:1:149632204:1
position: 30932722-30932736
TTCATCGAGCTGGATAAATTTGTGGTGGTT30932722 TTCATTGACAACATT CTTATCTATTCCAAAAATGAAGAGGAGCAT
10 dna:chromosome chromosome:AGPv3:10:1:149632204:1
position: 64338008-64338022
AAGCCCGAATTAGACAAGTTTGTGGTGGTC64338008 TTCATTGACAACATT TTGATCTATTCCAAGAATGAGGAGGAGCAT
10 dna:chromosome chromosome:AGPv3:10:1:149632204:1
position: 73782247-73782261
ATGGACTATCTCGATAAGTTTGTGGTGGTA73782247 TTCATTGACAACATT CTGATTTATTCTCAAAGCGAAGAAGAGCAT
1 dna:chromosome chromosome:AGPv3:1:1:301476924:1
position: 161218196-161218210
ATGCTCCTCTTTATTTTTGGAATAGATTAG161218196 AATGTTGTCAATGAA GACCACCACAAACTTATCTAACTCGAGCAT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 112808274-112808288
ACTTTTGGCAGGCCTCACCAACGGCTCCTC112808274 AATGTTGTCAATGAA CAGCTTGTAGAAAAGCCTCTCGTTCCCTTC
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 147542112-147542126
TGTTCCTCTTCATTTTTGGAATAGATCAAA147542112 AATGTTGTCAATGAA GACCACCACACATTTATCCAACTCGAGCAT
2 dna:chromosome chromosome:AGPv3:2:1:237917468:1
position: 186023977-186023991
AGAGAGAAGGCTTCCATTCAAGAGTTGATG186023977 AATGTTGTCAATGAA ATGATGTGGAACACAGAATTTGGTATTAGG
3 dna:chromosome chromosome:AGPv3:3:1:232245527:1
position: 53407378-53407392
ATGCTCCTCTTCATTTTTGGAATAGATCAG53407378 AATGTTGTCAATGAA GACCACCACAAATTTATCCAATTCGGGCAT
4 dna:chromosome chromosome:AGPv3:4:1:242062272:1
position: 74835061-74835075
ATGCTACTCTTCATTTTTGGAATAGATCAG74835061 AATGTTGTCAATGAA GACCACCACAAACTTGTCTAACTCAGGCAT
4 dna:chromosome chromosome:AGPv3:4:1:242062272:1
position: 123113608-123113622
ATGCTCCTCTTCATTTTTGGAATAGATCAG123113608 AATGTTGTCAATGAA GACCACCACAAACTTGTCTAACTCAGGCAT
6 dna:chromosome chromosome:AGPv3:6:1:169407836:1
position: 4909160-4909174
GGTAGAAATGTTGTTCATATGCCTAGGAGA4909160 AATGTTGTCAATGAA CCTTCTACAATTTATCATGCTTTAAAAGCT
7 dna:chromosome chromosome:AGPv3:7:1:176826311:1
position: 99776171-99776185
ATGTTCTTCGTCATCTTTGGAATAGATCAG99776171 AATGTTGTCAATGAA TACCACAACAAACTTATCAAGATATTCCAT
8 dna:chromosome chromosome:AGPv3:8:1:175377492:1
position: 81714034-81714048
AGAAGAAATGTTGTTCATATGCCTAGGAGA81714034 AATGTTGTCAATGAA CCTTCTACAATTTATCATGCTTTAAATGCT
9 dna:chromosome chromosome:AGPv3:9:1:157038028:1
position: 51078317-51078331
ATGCTCCTTTTCATTTTTGGAATAGATCAG51078317 AATGTTGTCAATGAA GACCACCACAAATTTATCCAACTCGGGCAT
Data Export:
下記のフォーマットで最大100000件まで検索結果を取得できます。
Debug Info:
Redirect URI : https://gggenome.dbcls.jp /ja/AGPv3/TTCATTGACAACATT
lang : ja |
db : AGPv3 |
k : 0 |
strand : |
nogap : |
query_string : TTCATTGACAACATT |
format : html |
download : |
debug :
0.009 | 0.009 | search_start;
0.083 | 0.075 | search_plus_done; http://172.18.8.75:28205/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.099 | 0.016 | search_minus_done; http://172.18.8.75:28205/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=32
0.112 | 0.012 | cgi_end;
GGGenome by
@meso_cacase at
DBCLS
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