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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 21:00:46, GGGenome : Spotted gar genome, LepOcu1 (Dec, 2011)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

LG1 dna:chromosome chromosome:LepOcu1:LG1:1:69065196:1 REF
position: 31843078-31843092
CTAATAAAATAATAATATGGTATGAGTTGC31843078TTCATTGACAACATTTTAAAGAAAATATTCCCATTCAGGTGCCTT
LG9 dna:chromosome chromosome:LepOcu1:LG9:1:53241385:1 REF
position: 45885692-45885706
ATTTGCCCTACATCTGAGGTGTGCAATGAG45885692TTCATTGACAACATTGACTGCAATGTTAAAAATATATACTGTATT
LG27 dna:chromosome chromosome:LepOcu1:LG27:1:15260519:1 REF
position: 11377710-11377724
CAGGTCAAACTCTTGCAAAGCCTTTTCCTT11377710TTCATTGACAACATTGCTGATGGAACTCAACTGACTCTGGAGTGA
LG2 dna:chromosome chromosome:LepOcu1:LG2:1:68575853:1 REF
position: 21241507-21241521
AAATCAGCTAAATTAATGTTCTAGACACAG21241507AATGTTGTCAATGAATTCAGAACTGTTTACAAAGGTTCACTGTAG
LG4 dna:chromosome chromosome:LepOcu1:LG4:1:73198282:1 REF
position: 33899358-33899372
TGGAATAGTGAGCTCATATACAGTATGAAC33899358AATGTTGTCAATGAAATGCATTGATGGGGTTTAAATGTCAATTCT
LG4 dna:chromosome chromosome:LepOcu1:LG4:1:73198282:1 REF
position: 36510767-36510781
CTTGGTTTTTAGCAAAACAGTATAAAGAAA36510767AATGTTGTCAATGAAGCTAATATTCCTTTAATGAGCATTTTACAG

Data Export:

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