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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2024-11-26 04:17:23, GGGenome : Oryza punctata genome, AVCL00000000 (Aug, 2013)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

3 dna:chromosome chromosome:AVCL00000000:3:1:38925377:1
position: 10657977-10657991
TGATCCCAATAGTTGTTTATTTTTGGACTC10657977TTCATTGACAACATTGCCATTTTGATGACTGTTCTGACATGAATG
9 dna:chromosome chromosome:AVCL00000000:9:1:26294017:1
position: 19098968-19098982
CTTTCAAATGATGGTCAAACTAATTATAAC19098968TTCATTGACAACATTAACTAAACGAGTGACGAGTGAAGAGTGAAG
1 dna:chromosome chromosome:AVCL00000000:1:1:46096743:1
position: 20076390-20076404
TCTACAAAACCTTTATTTAATAGTCCTAAA20076390AATGTTGTCAATGAAATAGAAACTACCTCAACATTCCTGAGGCTG
1 dna:chromosome chromosome:AVCL00000000:1:1:46096743:1
position: 23639178-23639192
ATGCTCCTTTTCATTCTTGGAGTAGATGAG23639178AATGTTGTCAATGAAAACAAAAACAAACTTATCCAAATATTCCAT
2 dna:chromosome chromosome:AVCL00000000:2:1:39559433:1
position: 32637391-32637405
TTTCCTACAATTACATAGATGCCACTAAGA32637391AATGTTGTCAATGAATAGCCATATGGCATGTACAAACTTACCTGA
5 dna:chromosome chromosome:AVCL00000000:5:1:31082981:1
position: 9172512-9172526
TATGATTGAGCACCCCTACCTACTTTGCAA9172512AATGTTGTCAATGAACTGTTTGTTCGCTACATAAATGTTCAATGA
5 dna:chromosome chromosome:AVCL00000000:5:1:31082981:1
position: 28601282-28601296
TCCTGCATAAATTACCTGGGTAAAACGGAA28601282AATGTTGTCAATGAACAGAAGCACATCTTGTCCTTCAGCATCACG
11 dna:chromosome chromosome:AVCL00000000:11:1:28494620:1
position: 5718250-5718264
GCTAGTATAAGAAAATAAATCAACTGGTTA5718250AATGTTGTCAATGAAATATAACTTATACGTTGTGAAAAAAATCGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/Orypu/TTCATTGACAACATT
lang : ja | db : Orypu | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.083 | 0.074 | search_plus_done; http://172.18.8.75:28188/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.088 | 0.005 | search_minus_done; http://172.18.8.75:28188/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.092 | 0.004 | cgi_end;

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