GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-12-28 20:25:14, GGGenome : Prunus persica genome, v2.1

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pp03:6492610-6492624
TATGTAATCAATAATGCTATTTGTCATATA6492610TTCATTGACAACATTGTTATTTTGTATTATATTTACCGACCACAT
Pp03:19911118-19911132
AGGTTTTGATGCCAAGCCACATGTGAGGCT19911118TTCATTGACAACATTTTCTTGCATTAAAAAATTCTAAGGGTACAA
Pp04:4305209-4305223
AATATAGTAGATGAAGGTTGAATCTGGATT4305209TTCATTGACAACATTCAAAAAGGGGTGTATTTGAATGAAAAAGTT
Pp04:6065501-6065515
GAAGTTTTCCTCTGTTCGGTTTAATTGTTT6065501TTCATTGACAACATTGGATCATGGTTAGAATTTCAAGATAAACAG
Pp07:14245327-14245341
AACAAACAATTTTAGTAAGTGAAATCTTAA14245327TTCATTGACAACATTCTACAGGAATTTATTAATCTATCTTTTCAG
Pp02:14948920-14948934
TTGTTTCTCTTGAAATTCTAACCATGATCC14948920AATGTTGTCAATGAAAAACAATTAAACCGAACAGAGGGAAACTTC
Pp04:12291272-12291286
TACATGCAAATATTCTTCCATACGCTTTTG12291272AATGTTGTCAATGAAATTTAGGAGGAGATGGTGAAGGAAGGAAGA
Pp07:2954026-2954040
CTGTTTATCTTGAAAGTCTAACCATGATCC2954026AATGTTGTCAATGAAAAATAATTAAACCGAACAGAGAGAAACTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/Ppersica_v2.0/TTCATTGACAACATT
lang : en | db : Ppersica_v2.0 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.083 | 0.074 | search_plus_done; http://172.18.8.74:28308/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.089 | 0.006 | search_minus_done; http://172.18.8.74:28308/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=45
0.091 | 0.002 | cgi_end;

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