GGGenome | Results

Help | Japanese

2025-04-05 19:05:32, GGGenome : Strigamia maritima genome, Smar1 (Feb, 2013)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

JH431854 dna:scaffold scaffold:Smar1:JH431854:1:146329:1
position: 33690-33704

CAACCAAAACCACAAAACAACATAAATCTT33690TTCATTGACAACATTCAATGGCAAAACACATATAGCATCATGAAC

JH432105 dna:scaffold scaffold:Smar1:JH432105:1:558451:1
position: 552321-552335

CCATATAGAAATATGGAAAAATAGTTCACT552321TTCATTGACAACATTGTTCTCTCTCTTTCTAAATGAAATATAGAA

JH431380 dna:scaffold scaffold:Smar1:JH431380:1:254879:1
position: 237282-237296

ATCATTCTCTATAAAACGTAGAAAAAGAAA237282AATGTTGTCAATGAAAAGGTCAGGTCGGCTTTCAACTCTGATATA

JH432114 dna:scaffold scaffold:Smar1:JH432114:1:1273652:1
position: 1025624-1025638

TCGTGTTTCGAGGCATATATTTTTGTTTTA1025624AATGTTGTCAATGAACAATAATAATTCGAGCGCTGTTTATTATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.078 | 0.070 | search_plus_done; http://172.18.8.76:28160/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.083 | 0.005 | search_minus_done; http://172.18.8.76:28160/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.084 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).