GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-04-24 14:14:04, GGGenome : Rhesus genome, T2T-MMU8v2.0, D3G 26.03 (Mar, 2026)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

chr2 NC_133407.1
position: 120759309-120759323
GCCTGTTTTTCATATGCATATGTAATAGGG120759309AATGTTGTCAATGAAAACACAATAGTATTTGGAGTGCAGCATAGT
chr11 NC_133416.1
position: 86302020-86302034
GTAAGATAGGTTTGTTCCAGAAGTTTAAAA86302020AATGTTGTCAATGAATTTGATAAAATTTAATATTCACATTAGAAG
chr14 NC_133419.1
position: 40834398-40834412
GTTTGCTCTATTCACTGTCCTCAACGCTAG40834398AATGTTGTCAATGAACAAGACATATCTATGTTCCTGGAAACTCAA
chr19 NC_133424.1
position: 51993240-51993254
ACTCCCTTAGGAGAGCTGTAACATTATACT51993240AATGTTGTCAATGAAAAGCTAAGACAGGCCAGGGGTGGTGGCTCA
chr19 NC_133424.1
position: 52044741-52044755
CTCCCTTAGGAGAGCCGTTAACATTATACT52044741AATGTTGTCAATGAAAAAGCTAAGATAGGCAGGGCGTGGTGGCTC
chr5 NC_133410.1
position: 157489154-157489168
CAGAATATATTATCGCTTTGAACACAGATT157489154TTCATTGACAACATTTTGTGGGCATCCATTTAATATTAATATTAA
chr5 NC_133410.1
position: 174361316-174361330
TAAAACCTCTGATTTTGTGTAACACTCCTT174361316TTCATTGACAACATTAAACAGCAATTAACTATTTGCTGACTACAT
chr5 NC_133410.1
position: 189883973-189883987
TTTGGACCCCCAGATCAGTCTTCATATTCT189883973TTCATTGACAACATTCATGAAGTTCTGCAGAAATTAGATAGAATT
chr5 NC_133410.1
position: 194700946-194700960
GCCTGAGCCACCATGCCCAGCTTGCTATTC194700946TTCATTGACAACATTCACTTAAACAAACAAACATCCATAAAATTA
chr16 NC_133421.1
position: 15613280-15613294
GCCTCTGGGCCTATATTAGATGGGCCATGC15613280TTCATTGACAACATTGATTTTATGTTTATTTGTGAAAGGGCAGAA
chr17 NC_133422.1
position: 62192188-62192202
TGTTCAAAGTTTTCCCCTCCAATGTATCTT62192188TTCATTGACAACATTCGGATTTATCACATCAATCAGTCAATAAAT
chr17 NC_133422.1
position: 78990098-78990112
GCAGTCTGGAGGTTCTCCCTGGAGGCTGTA78990098TTCATTGACAACATTGCCTGAGGTAACTCACACTGAGGTGACAAC
chr19 NC_133424.1
position: 52202614-52202628
GTGAGCCACCATGCTGGCCTATCTTAGCTT52202614TTCATTGACAACATTAGTATAATGTTAACAGCTCTCCTAAGGGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/T2T-MMU8v2.0_d3g2603/AATGTTGTCAATGAA
lang : en | db : T2T-MMU8v2.0_d3g2603 | k : 0 | strand : | nogap : | query_string : AATGTTGTCAATGAA | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.082 | 0.073 | search_plus_done; http://172.18.8.72:29036/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.089 | 0.007 | search_minus_done; http://172.18.8.72:29036/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=45
0.095 | 0.006 | cgi_end;

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