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2025-04-08 09:08:57, GGGenome : Rabbit spliced RNA, RefSeq on UM_NZW_1.0chr, D3G 23.02 (Feb, 2023)
Summary:
Results:
検索語に色がつきます(ミスマッチ ・挿入 欠失) 。
検索結果のうち50件までを表示しています。
XM_002713403.4|LOC100008708;100008708|chr9:92029629:92032404:+|spliced::chr9:92029629-92032404(+)
position: 30-44
GAATGCTACACTCCAAATACTATTGTGTT30 TTCATTGACAACATT CACTATTACATATGCATATGAACACCAGTC
XM_051847092.1|C1H9orf153;100342003|chr1:86246548:86253126:-|spliced::chr1:86246548-86253126(-)
position: 1350-1364
AGAAACACATTGGGAATCTTGGAAGTGGAA1350 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257491.3|C1H9orf153;100342003|chr1:86246548:86273702:-|spliced::chr1:86246548-86273702(-)
position: 2241-2255
AGAAACACATTGGGAATCTTGGAAGTGGAA2241 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
XM_051847101.1|C1H9orf153;100342003|chr1:86246548:86273702:-|spliced::chr1:86246548-86273702(-)
position: 2302-2316
AGAAACACATTGGGAATCTTGGAAGTGGAA2302 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257487.3|C1H9orf153;100342003|chr1:86246548:86276381:-|spliced::chr1:86246548-86276381(-)
position: 3945-3959
AGAAACACATTGGGAATCTTGGAAGTGGAA3945 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
XM_051847112.1|C1H9orf153;100342003|chr1:86246548:86276382:-|spliced::chr1:86246548-86276382(-)
position: 4007-4021
AGAAACACATTGGGAATCTTGGAAGTGGAA4007 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257472.3|C1H9orf153;100342003|chr1:86246548:86287979:-|spliced::chr1:86246548-86287979(-)
position: 1434-1448
AGAAACACATTGGGAATCTTGGAAGTGGAA1434 AATGTTGTCAATGAA ACCAAGAACCTTCCAAAATTATCCCAATTA
Data Export:
下記のフォーマットで最大100000件まで検索結果を取得できます。
Debug Info:
Redirect URI : https://gggenome.dbcls.jp /ja/UM_NZW_1.0chr_RefSeq_spliced_d3g2302/TTCATTGACAACATT
lang : ja |
db : UM_NZW_1.0chr_RefSeq_spliced_d3g2302 |
k : 0 |
strand : |
nogap : |
query_string : TTCATTGACAACATT |
format : html |
download : |
debug :
0.009 | 0.009 | search_start;
0.079 | 0.070 | search_plus_done; http://172.18.8.78:28955/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.005 | search_minus_done; http://172.18.8.78:28955/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=49
0.088 | 0.004 | cgi_end;
GGGenome by
@meso_cacase at
DBCLS
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