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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 22:43:01, GGGenome : Rabbit spliced RNA, RefSeq on UM_NZW_1.0chr, D3G 24.03 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

XM_002713403.4|LOC100008708;100008708|chr9:92029629:92032404:+|spliced::chr9:92029629-92032404(+)
position: 30-44
GAATGCTACACTCCAAATACTATTGTGTT30TTCATTGACAACATTCACTATTACATATGCATATGAACACCAGTC
XM_051847092.1|C1H9orf153;100342003|chr1:86246548:86253126:-|spliced::chr1:86246548-86253126(-)
position: 1350-1364
AGAAACACATTGGGAATCTTGGAAGTGGAA1350AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257491.3|C1H9orf153;100342003|chr1:86246548:86273702:-|spliced::chr1:86246548-86273702(-)
position: 2241-2255
AGAAACACATTGGGAATCTTGGAAGTGGAA2241AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
XM_051847101.1|C1H9orf153;100342003|chr1:86246548:86273702:-|spliced::chr1:86246548-86273702(-)
position: 2302-2316
AGAAACACATTGGGAATCTTGGAAGTGGAA2302AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257487.3|C1H9orf153;100342003|chr1:86246548:86276381:-|spliced::chr1:86246548-86276381(-)
position: 3945-3959
AGAAACACATTGGGAATCTTGGAAGTGGAA3945AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
XM_051847112.1|C1H9orf153;100342003|chr1:86246548:86276382:-|spliced::chr1:86246548-86276382(-)
position: 4007-4021
AGAAACACATTGGGAATCTTGGAAGTGGAA4007AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA
XM_008257472.3|C1H9orf153;100342003|chr1:86246548:86287979:-|spliced::chr1:86246548-86287979(-)
position: 1434-1448
AGAAACACATTGGGAATCTTGGAAGTGGAA1434AATGTTGTCAATGAAACCAAGAACCTTCCAAAATTATCCCAATTA

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