GGGenome | Results

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2025-04-10 22:30:30, GGGenome : Vigna angularis genome, ver3 (Nov, 2011)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

scaffold_543
position: 59473-59487

TCCTCAAGTTGGAAGTTCTTACGCGTATTT59473TTCATTGACAACATTATTTACTAGAGGTCCTTCACCATTTAGTGT

6
position: 1865416-1865430

TATATTTAGGTTTGCAGAATTATAGATGAA1865416TTCATTGACAACATTTGCAATGTTGGTGACCACTTGCTTACTTTG

5
position: 1967080-1967094

TACACTCTTTTGCTACATAACCACACAATT1967080AATGTTGTCAATGAAAAATTGACGGAATAGATTTAATTGATACAC

scaffold_273
position: 287501-287515

TGATGCAATTCTCACTTCTTCACTGTAGAG287501AATGTTGTCAATGAATATGGACTGATTGAACATCTGGAATTTGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.079 | 0.070 | search_plus_done; http://172.18.8.77:28238/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.005 | search_minus_done; http://172.18.8.77:28238/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.085 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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