GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2024-11-27 16:39:18, GGGenome : A. gambiae genome, IAGEC MOZ2/anoGam1 (Feb, 2003)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

chr2L:29546211-29546225
ACGATTACTTATTTGTCTTAAATTGAAGCA29546211TTCATTGACAACATTTAAAGAAAATACTTTTTGTTGTTACTATTT
chr3R:45751612-45751626
TCCTCCTTCGCTCTCACACACACACACACC45751612TTCATTGACAACATTGGAAACTACACACATTGAGGAAATTTAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/anoGam1/TTCATTGACAACATT
lang : en | db : anoGam1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.086 | 0.077 | search_plus_done; http://172.18.8.76:28093/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.090 | 0.004 | search_minus_done; http://172.18.8.76:28093/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.090 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).