GGGenome | Results

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2025-04-08 09:08:51, GGGenome : C. remanei genome, WUGSC 15.0.1/caeRem3 (May, 2007)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

chrUn:108941169-108941183

AAAAAAGTTCAGAAAAATCAATGTTTTCTC108941169TTCATTGACAACATTGTAAATCACAACAAATTTGCAGATTCAAGT

chrUn:138795702-138795716

CGTGACCAGGAAGGACAAGATGTGCTTCTC138795702TTCATTGACAACATTTTCCGTTTCACTCAAGCCGGATCAGAAGTG

chrUn:3831058-3831072

GGCGAAGAATAATACGAGATTTTGCGGGAA3831058AATGTTGTCAATGAAAACGTACAAATATCAAATGCGTACTTTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.76:28111/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.085 | 0.004 | search_minus_done; http://172.18.8.76:28111/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=48
0.085 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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