GGGenome | Results

2025-04-05 23:57:25, GGGenome : Marmoset spliced RNA, TRaC 21.01 on calJacRKC1912, D3G 21.01 (Jan, 2021)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

TRaC2101L1e5a5;ENSCJAG00000014861|RBMS1|chr6:92541779:92686106:-|spliced::chr6:92541779-92686106(-)
position: 1297-1311

AAGTTCCAAAGTAAATTTGCATTATATGCT1297AATGTTGTCAATGAATAGAATATAAATGTGCTACTTTGCTGCAAT

TRaC2101L1e5a6;ENSCJAG00000014861|RBMS1|chr6:92548603:92606985:-|spliced::chr6:92548603-92606985(-)
position: 1132-1146

AAGTTCCAAAGTAAATTTGCATTATATGCT1132AATGTTGTCAATGAATAGAATATAAATGTGCTACTTTGCTGCAAT

Data Export:

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Debug Info:

0.009 | 0.009 | search_start;
0.081 | 0.072 | search_plus_done; http://172.18.8.75:28853/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.084 | 0.004 | search_minus_done; http://172.18.8.75:28853/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=50
0.086 | 0.002 | cgi_end;