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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2024-11-22 16:06:39, GGGenome : Painted turtle genome, v3.0.1/chrPic1 (Dec, 2011)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

JH584449:10174267-10174281
ACTTGTCTATGTAACCTTTAAAAATCTTCC10174267TTCATTGACAACATTCTCATTTGATCTTATCTGTTTCAAGACTGG
JH584488:256385-256399
GCTATCCGTGGAATGAATAACTGCAAACAA256385TTCATTGACAACATTTTTGCTCTACTTCCTTCTGCATCAGTAAAA
JH584535:8861005-8861019
ATAGAAAAAGTCTTCCTAATTACATATTCC8861005TTCATTGACAACATTGTCTCCAACCGTGAAAGATGGATGAGAGTT
JH584568:941472-941486
GAAGCTGTAGGATTTATGGTAAACAGAGTT941472TTCATTGACAACATTGGTGATGGATTAATTTAAAGCAGGAAACTA
JH584613:2379542-2379556
ATGGAATGAGAATATAGAAAGGAGTAACAC2379542TTCATTGACAACATTAGCTTCTATATGCCTCCATAAGACTTGTTT
JH584734:2400367-2400381
TGGACTAGAGCTGGCTGGAGGAAAATTCCA2400367TTCATTGACAACATTTGAGATTTTGAAATTTATTTATAAAAACAA
JH584826:1954127-1954141
GGCTTTGGATCAGGCCCTAAAATCTGCTCC1954127TTCATTGACAACATTATACTATAGCCCCTTTTCAGCAGAATACGT
JH584853:1406894-1406908
AATCAGAGATCAAGTCATACATGATGCTGG1406894TTCATTGACAACATTCATCAAAGCCAAGATGGTGCTATCACAGCA
JH584500:1126814-1126828
ATACTGCAAAACTTTTCCAGGGGTAGTCTC1126814AATGTTGTCAATGAATTAGCTTCAGCCATGTGCTCAGTTCTCATG
JH584517:1752225-1752239
GGGGTCACTGCCTCTAATGCATGTGTCGAG1752225AATGTTGTCAATGAAAACCCTCCTGGTGGCCAGATCAATAGACCC
JH584632:970057-970071
TTTTTTCAGTCAGTGTTCAGGCCAACTCCC970057AATGTTGTCAATGAAGTTTTAGCCCCAGTAAGGACAAATAGATTA
JH584680:4976941-4976955
AAAGTTCAGCTGCAGTGATGACAACGTATT4976941AATGTTGTCAATGAAGCACCCATTCCCTGACACAAATGCCGGAGA
JH584813:2750134-2750148
CTGTACAAAGCAATGGTTGTTTAAAGAGAC2750134AATGTTGTCAATGAAATTCCAAGCAATTCTGGCTCAAGAAGTGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/chrPic1/TTCATTGACAACATT
lang : ja | db : chrPic1 | k : 0 | strand : | nogap : | query_string : TTCATTGACAACATT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.086 | 0.077 | search_plus_done; http://172.18.8.76:28081/match?q=TTCATTGACAACATT&k=0&no_gap=0&offset=0&limit=50
0.092 | 0.006 | search_minus_done; http://172.18.8.76:28081/match?q=AATGTTGTCAATGAA&k=0&no_gap=0&offset=0&limit=42
0.093 | 0.001 | cgi_end;

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