GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 19:21:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Homo sapiens DNA, chromosome 1, nearly complete genome.
AP023461.1:93245073-93245092
AGGTTCCCGGTTTATAAAACCAGCACGCTT93245073AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
Homo sapiens isolate CHM13 chromosome 1.
CP068277.2:94176720-94176739
AGGTTCCCGGTTTATAAAACCAGCACGCTT94176720AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
Homo sapiens isolate NA24385 chromosome 1.
CP139523.1:94489636-94489655
AGGTTCCCGGTTTATAAAACCAGCACGCTT94489636AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
Homo sapiens isolate NA24385 chromosome 1.
CP139546.1:94574636-94574655
AGGTTCCCGGTTTATAAAACCAGCACGCTT94574636AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
Heterocephalus glaber genome assembly, chromosome: 1.
OX090909.1:39159515-39159534
ACATTTTTGTCAACAAAATTGAAAAGAAGA39159515AAAAAGAAGAAAAGGGTGGGACTGAAGGAGCCTGTGGCCTCAGTGGTGGT
Heterocephalus glaber genome assembly, chromosome: 1.
OX090941.1:30500172-30500191
ACATTTTTGTCAACAAAATTGAAAAGAAGA30500172AAAAAGAAGAAAAGGGTGGGACTGAAGGAGCCTGTGGCCTCAGTGGTGGT
Bos mutus isolate yakQH1 chromosome 23.
CP027091.1:34499588-34499607
GGACCCCAGAGTCCATTATTAAAACGGGCC34499588AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACACGTCTAGGTAAATA
Bos taurus genome assembly, chromosome: 23.
LR962754.1:41958114-41958133
GGACCCCAGAGTCCACTATTAAAACGGGCC41958114AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Bos taurus genome assembly, chromosome: 23.
LR962879.1:42252323-42252342
GGACCCCAGAGTCCACTATTAAAACGGGCC42252323AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Bos gaurus x Bos taurus genome assembly, chromosome: 23.
OX258977.1:42793692-42793711
GGACCCCAGAGTCCACTATTAAAACGGGCC42793692AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Bos taurus strain mammals genome assembly, chromosome: 23.
OX344712.1:42980227-42980246
GGACCCCAGAGTCCACTATTAAAACGGGCC42980227AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Hyperoodon ampullatus genome assembly, chromosome: 10.
OX457065.1:79859981-79860000
AAGGTAAAATAAAAACACAACAGAAAAAAG79859981AAAAAGAAGAAAAGGGTGGGGGGGAACAAGCGAGAAGGAGAGAACAATAA
Erinaceus europaeus genome assembly, chromosome: 5.
OX485814.1:10274412-10274431
CCCAACTTCTTATTTTGTGTTTTGAGAGAC10274412AAAAAGAAGAAAAGGGTGGGGGACACCAAAGCACCACTCTACCACCCAGT
Plecotus auritus genome assembly, chromosome: 6.
OY734027.1:84411821-84411840
TCTGAAATCAATAAAAATATCTTTTTTTTA84411821AAAAAGAAGAAAAGGGTGGGGACACATGTCCTGCCAAGAGCAAGAGAGAG
Bos taurus genome assembly, chromosome: Bta23.
OY997251.1:42493146-42493165
GGACCCCAGAGTCCACTATTAAAACGGGCC42493146AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Vespertilio murinus genome assembly, chromosome: 5.
OZ004708.1:75893721-75893740
CTCTAAAATCAATAAAAATATATCTTTTTA75893721AAAAAGAAGAAAAGGGTGGGACACAAGAGCAAGAGAGAGAAGCTGAGTGA
Danio kyathit genome assembly, chromosome: 6.
LR812524.1:42119014-42119033
AGTAAACCAAACCAAAGCACATACAAGGAA42119014AAAAAGAAGAAAAGGGTGGGGGGTTGCTAATATCATAGCCTTAATTATTA
Blennius ocellaris genome assembly, chromosome: 7.
OY730207.1:19288213-19288232
ACTTTTTTTTTTTTCATAAAAAAAAAAAAA19288213AAAAAGAAGAAAAGGGTGGGAAGAGAGAAAGATTACTGTACCGGGCCCCC
Eukaryotic synthetic construct chromosome 1.
CP034487.1:94784055-94784074
AGGTTCCCGGTTTATAAAACCAGCACGCTT94784055AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
Eukaryotic synthetic construct chromosome 1.
CP034512.1:94784055-94784074
AGGTTCCCGGTTTATAAAACCAGCACGCTT94784055AAAAAGAAGAAAAGGGTGGGGGCATTTGAAACAATACTAAGAGGCTTTAA
2P47-A11-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence.
JG451539.1:419-438
GTTGTTTATTATATAGAGAGAGATGCAATG419AAAAAGAAGAAAAGGGTGGGGGTGAATGAAGGAGGTGGAAACTTGCTGTA
A10-057A10 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791315.1:623-642
GTTGTTTATTATATAGAGAGAGATGCAATG623AAAAAGAAGAAAAGGGTGGGGATAAATGAGGGAGGTGGAAACTTGCTGTA
APKI3490.g2 HF70_10-07-02 uncultured marine microorganism HF70_10-07-02 genomic clone HF0070_043B05, genomic survey sequence.
DU735901.1:343-362
TACCACTTGGTTATGAGGTACATTTGTTTG343AAAAAGAAGAAAAGGGTGGGGGCTTTATGCGCTCTCAGATTCCTGCTTTC
Rattus norvegicus clone CH230-2O19, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC094161.6:71701-71720
TACAAATTAGTCCTATGAAAACTTAAGTAT71701AAAAAGAAGAAAAGGGTGGGGAATGGTATAGGAAGATAGAATGTAGATAA
Papio anubis clone RP41-255B9, WORKING DRAFT SEQUENCE, 12 ordered pieces.
AC149174.2:162395-162414
AAAAAGGAGAAAAAGGAAAAAAAAAAAAAA162395AAAAAGAAGAAAAGGGTGGGTTTGTGCCAGATACTTACGCTGACTTTGGG
Papio anubis clone RP41-389I1, WORKING DRAFT SEQUENCE, 16 unordered pieces.
AC149183.1:133644-133663
AAAAAGGAGAAAAAGGAAAAAAAAAAAAAA133644AAAAAGAAGAAAAGGGTGGGTTTGTGCCAGATACTTACGCTGACTTTGGG
Papio anubis clone RP41-449F21, WORKING DRAFT SEQUENCE, 13 ordered pieces.
AC149260.2:64263-64282
AAAAGGAGAAAAAGAAAAAAAAAAAAAAAA64263AAAAAGAAGAAAAGGGTGGGTTTGTGCCAGATACTTACGCTGACTTTGGG
Bos taurus clone CH240-418M13, WORKING DRAFT SEQUENCE, 9 unordered pieces.
AC222457.1:99765-99784
GGACCCCAGAGTCCACTATTAAAACGGGCC99765AAAAAGAAGAAAAGGGTGGGGGGAATCCCGTATACATGTCTAGGTAAATA
Gossypioides kirkii chromosome KI_01.
CP032244.1:5280929-5280948
GTTGTTTATTATATAGAGAGAGATGCCATG5280929AAAAAGAAGAAAAGGGTGGGGGTAAATGAGGGAGGTGGAAACTTGCTGTA
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:6716130-6716149
GTTGTTTATTATATAGAGAGAGATGCAATG6716130AAAAAGAAGAAAAGGGTGGGGGTGAATGAAGGAGGTGGAAACTTGCTGTA
Wolffia australiana isolate 7733 chromosome 10.
CP092609.1:3086457-3086476
ACCTTCTAGTGGAATGAGTGGAAAGTAATA3086457AAAAAGAAGAAAAGGGTGGGAGGGCCCCCCTAATCTTTCTGGTATTGGCA
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:8680015-8680034
TTGTTGTTTATTATATAGAGAGATGCAATG8680015AAAAAGAAGAAAAGGGTGGGGATAAATGAGGAGGTGGAAACTTGCTGTAG
Gossypium bickii isolate GPG1lz chromosome 1.
CP106715.1:9099378-9099397
GTTGTTTATTATATAGAGAAAGATGCAATG9099378AAAAAGAAGAAAAGGGTGGGGGTAAATGAGGGAGGTGGAAACTTGCTGTA
Gossypium rotundifolium isolate GPK201 chromosome 8.
CP106729.1:1368697-1368716
TGTTGTTTATTATATAGAGAAGATGCAATG1368697AAAAAGAAGAAAAGGGTGGGGGTAAATGAGGGAGGTGGAAACTTGCTGTA
Microcos paniculata chromosome 2b.
CP131448.1:35176939-35176958
ATGGCTTTTGCACTTGCATGGCTCCATTAA35176939AAAAAGAAGAAAAGGGTGGGACAATGTCTTTTGGTTATATCTTTATACAT
Microcos paniculata chromosome 7b.
CP131453.1:26834216-26834235
TGAGTTTTGGACTTGTATGGCTCCATTAAA26834216AAAAAGAAGAAAAGGGTGGGGCAATGGATAAATATATATATATAAATGTA
Microcos paniculata chromosome 2a.
CP131457.1:34286657-34286676
ATGGCTTTTGCACTTGCATGGCTCCATTAA34286657AAAAAGAAGAAAAGGGTGGGACAATGTCTTTTGGTTATATCTTTATACAT
Microcos paniculata chromosome 7a.
CP131462.1:27343533-27343552
TGAGTTTTGGACTTGTATGGCTCCATTAAA27343533AAAAAGAAGAAAAGGGTGGGGCAATGGATAAATATATATATATAAATGTA
Gossypium hirsutum clone NBRI_TRANS-922 microsatellite sequence.
JX964653.1:161-180
GTTGTTTATTATATAGAGAGAGATGCAATG161AAAAAGAAGAAAAGGGTGGGGGTGAATGAAGGAG
Gormaniella terricola chloroplast, complete genome.
OL839336.1:428711-428730
TTTTCTTTCTCTCTCTATTCTTCTCTTTCA428711AAAAAGAAGAAAAGGGTGGGGGTTTTTTTTCTAATAAAAACACGTCTTTT
Solanum dulcamara genome assembly, chromosome: 1.
OX359252.1:17927634-17927653
GGGTTTAGGTGGGATTGAGAGGTGGAAAAG17927634AAAAAGAAGAAAAGGGTGGGGTTAGTATTGTATAAGTATAATATATGTAT
Pulicaria dysenterica genome assembly, chromosome: 8.
OX359295.1:62788179-62788198
GTAAGTGATTGGGGAGTAAAAAAGAAAAAG62788179AAAAAGAAGAAAAGGGTGGGCAAGACAACAAGCTAGGAGGACTGCAAAAG
Sambucus nigra genome assembly, chromosome: 13.
OX422219.1:395353012-395353031
TACATAAATGGACTATTGGAGTAATGTGCC395353012AAAAAGAAGAAAAGGGTGGGAAGGAAGGAAAAAAGGTATTCGAAATGGAT
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737382.1:440760523-440760542
AATTACATACAGTAGAAAAGACGGGCAAGA440760523AAAAAGAAGAAAAGGGTGGGTGGGCGGGTGGGTTGATGATCGGATCATGG
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737389.1:441340708-441340727
AATTACATACAGTACAAAAGACGGGCAAGA441340708AAAAAGAAGAAAAGGGTGGGTGGGCGGGTGGGTTGATGATCGGATCATGG
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737397.1:432208029-432208048
AATAAATTACATACAAAAGACAGGCCAATA432208029AAAAAGAAGAAAAGGGTGGGTGGGTGGGTTGATGATCATGGCCGGCGTGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737404.1:426893252-426893271
AATAAATTACATACAAAAGACAGGCCAATA426893252AAAAAGAAGAAAAGGGTGGGTGGGTGGGTTGATGATCATGGCCGGCGTGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737414.1:425962214-425962233
TACATATACAGTACAAAAAGACGGGCAAGA425962214AAAAAGAAGAAAAGGGTGGGTGGGTTGATGATCATGGCCGGCGTGCCTGT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737472.1:404589479-404589498
AATTACACACAGTAGAAAAGACGGGCAAGA404589479AAAAAGAAGAAAAGGGTGGGTGGGTGGGTGGGTTGATGATTAGGATCATG
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737479.1:420417482-420417501
AATTACATACAGTACAAAAGACGGGCAAGA420417482AAAAAGAAGAAAAGGGTGGGTGGGTTGATGATTAGGATCATGGCCGGCGT
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737486.1:404807242-404807261
AATTACATACAGTACAAAAGACGGGCAAGA404807242AAAAAGAAGAAAAGGGTGGGTGGGTTGATGATTAGGATCATGGCCGGCGT
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737616.1:322764525-322764544
AATTACATACATACAAAAGACAGGCCAATA322764525AAAAAGAAGAAAAGGGTGGGTGGGTGGGTTGATGATCATGGCCGGCGTGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737652.1:395109902-395109921
AATTACATACAGTACAAAAGACGGCCAAGA395109902AAAAAGAAGAAAAGGGTGGGTGGGTGGGTTGATGATCATGGCCGGCGTGC
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737892.1:418018912-418018931
AATTACATACAGTAGAAAAGACGGGCAAGA418018912AAAAAGAAGAAAAGGGTGGGTGGGTTGATGATTAGGATCATGGCCGGCGT
Berberis vulgaris genome assembly, chromosome: 5.
OY747128.1:69096965-69096984
CGGTCTCATAGTAAACAGATAGAGGGAGCA69096965AAAAAGAAGAAAAGGGTGGGATGGGGTCATTGACGTCGTAAAAACAGAGG
Diabrotica virgifera virgifera genome assembly, chromosome: 3.
OU830626.1:183077627-183077646
TCATTTTGGTTAGATAAGAATATTTCTAAT183077627AAAAAGAAGAAAAGGGTGGGCAGAGCAATAGTGGAGTCGGTATTGTGTTA
Diabrotica virgifera virgifera genome assembly, chromosome: 6.
OU830629.1:227136998-227137017
TCATTTTGGTGGGATAAGAATTTTTCTAAC227136998AAAAAGAAGAAAAGGGTGGGCACAGCAATAGTAAAGTCGGTATTGTGTTA
Xylocampa areola genome assembly, chromosome: 8.
OW285207.1:13464743-13464762
GGCATCTGGTGAAGGGTTTTGGAAAAGAAA13464743AAAAAGAAGAAAAGGGTGGGAAGAGAAAAAAGAGACGTAACCGAGGTTTA
Anopheles maculipalpis genome assembly, chromosome: X.
OX030897.1:3675510-3675529
TTTGCTTGCACCCAGCAACGAAACAAAAAA3675510AAAAAGAAGAAAAGGGTGGGCAGAAAATGCCGAACGAGCTCCAAAGGATC
Hemithea aestivaria genome assembly, chromosome: 11.
OX382334.1:7868875-7868894
TTCGTCCATCGATTCTCTTTAAAGTCGCTT7868875AAAAAGAAGAAAAGGGTGGGATTTATCCTGACTTCTTTAGTCTGCTACCA
Brachyopa scutellaris genome assembly, chromosome: 1.
OX459112.1:126366410-126366429
GCGTTGCTCTCTGAAGGTAGCGGAGTGGAG126366410AAAAAGAAGAAAAGGGTGGGAGCGGAGAGATGGAATGGAACGGTGCTTTT
Chalcis sispes genome assembly, chromosome: 5.
OX465098.1:64387688-64387707
GTGTGTGCGTGAAAGAAGAAGAAGAAAAAA64387688AAAAAGAAGAAAAGGGTGGGAGATTCACTTCTTTAACGGTCGCTTGAGCC
Luidia sarsii genome assembly, chromosome: 10.
OX465110.1:15953383-15953402
CCCTTGAGTCTTCTGAAAAAAGAAAAAAGA15953383AAAAAGAAGAAAAGGGTGGGAATAACTGAGAACGACCTGAGCAAAAAACA
Andrena trimmerana genome assembly, chromosome: 1.
OX578059.1:63051098-63051117
ATCTAGTGTAATAGATAATGGGTCTTCCTG63051098AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena trimmerana genome assembly, chromosome: 1.
OX578059.1:93012751-93012770
ATCTAGTGTAATAGATAATGGGTCTTCCTG93012751AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena trimmerana genome assembly, chromosome: 1.
OX578059.1:117694687-117694706
ATCTAGTGTAATAGATAATGGGTCTTCCTA117694687AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena trimmerana genome assembly, chromosome: 2.
OX578060.1:85024725-85024744
ATCTAGTGTAATAGATAATGGGTCTTCCTG85024725AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena trimmerana genome assembly, chromosome: 5.
OX578063.1:10313014-10313033
ATCTAGTGTAATAGATAATGGGTCTTCCTG10313014AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena carantonica genome assembly, chromosome: 1.
OX731548.1:61987312-61987331
ATCTAGTGTAATAGATAATGGGTCTTCCTG61987312AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena carantonica genome assembly, chromosome: 1.
OX731548.1:98289095-98289114
ATCTAGTGTAATAGATAATGGGTCTTCCTG98289095AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Andrena carantonica genome assembly, chromosome: 3.
OX731550.1:36873763-36873782
ATCTAGTGTAATAGATAATGGGTCTTCCTG36873763AAAAAGAAGAAAAGGGTGGGTTTGATCTATTCGGAGGAGGCGCTTATACA
Sepiola atlantica genome assembly, chromosome: 10.
OY744524.1:98998465-98998484
GTTAGGTCAATTGAATGTATTTATTATTTG98998465AAAAAGAAGAAAAGGGTGGGGCCGTGATTAAAGACGGGTTTAGGGCGAGA
Lucinisca nassula genome assembly, chromosome: 1.
OY757010.1:11784571-11784590
TCCCAGCACTATCGTGTGATGGGGTATAAC11784571AAAAAGAAGAAAAGGGTGGGAAAAAAAAAAGAGGAATGAAAAACCAAAAA
Alviniconcha strummeri genome assembly, chromosome: 12.
OY757552.1:4595463-4595482
TAAGGAGGTGGAAAGCAGCTGCCATGTGAA4595463AAAAAGAAGAAAAGGGTGGGGGGGGGGGTGATGGAGGTTGGGGTGAATTC
Andrena marginata genome assembly, chromosome: 1.
OZ010659.1:14498130-14498149
ATCTAGTGTAATAGATAATGGGTCTTCCTG14498130AAAAAGAAGAAAAGGGTGGGCTTGATCTTTTCGGAGGAGGCGCTTATACA
Andrena marginata genome assembly, chromosome: 6.
OZ010664.1:12517233-12517252
ATCTAGTGTAATAGATAATGGATCTTCCTG12517233AAAAAGAAGAAAAGGGTGGGCTTGATCTTTTCGGAGGAGGCGCTTATACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAAAGAAGAAAAGGGTGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAAGAAGAAAAGGGTGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.390 | 0.381 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAAGAAGAAAAGGGTGGG&k=0&no_gap=0&offset=0&limit=50
0.472 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=CCCACCCTTTTCTTCTTTTT&k=0&no_gap=0&offset=0&limit=0
0.472 | 0.000 | cgi_end;

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