GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 21:05:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS42K20.
DH962229.1:248-267
AGCGAAAAACACAAGAAAAATAAAAAATAA248AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACTACACACAC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10125466-10125485
CCGAAAAGCACAAGAAAAATAAAAAATTAA10125466AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACACACACACA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10128505-10128524
GTGAAAAACACAAGAAAAATAAAAAATAAA10128505AAACACAGACGTGTGAAGCGAGCAAAAAACAAAAAAAAAACGCAAGTGTT
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10129895-10129914
AGCGAAAAACACAAGAAAAATAAAAAATAA10129895AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACTACACACAC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10131415-10131434
GCAAAAAACACAAGAAAAATAAAAAATAAA10131415AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAACTACACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16252790-16252809
CCGAAAAGCACAAGAAAAATAAAAAATAAA16252790AAACACAGACGTGTGAAGCGAGCGAAAAAACAAAAAAAAAAACACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16255831-16255850
AGTGAAAACACAAGAAAAATAAAAAATAAA16255831AAACACAGACGTGTGAAGCGAGCAAAAAACAAAAAAAAAAACGCAAGTGT
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16257223-16257242
AGCGAAAAACACAAGAAAAATAAAAAATAA16257223AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAAACTACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16258765-16258784
GCAAAAAACACAAGAAAAATAAAAAATAAA16258765AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAACTACACACACA
Valencia hispanica genome assembly, chromosome: 13.
OY747712.1:37903055-37903074
GGATTAACAGGTTGTCCTGATGGGGCCCTC37903055CGCTTCACACGTCTGTGTTTGTCCAAAACAGACAAGGATGAATTAATGAT
Arachis hypogaea DNA, clone: AHGS48F15.
DH961653.1:33-52
TAACACTTGCGTTTTTTTTTGTTTTTTGCT33CGCTTCACACGTCTGTGTTTTTTATTTTTTATTTTTCTTGTGTTTTTCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAACACAGACGTGTGAAGCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAACACAGACGTGTGAAGCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=AAACACAGACGTGTGAAGCG&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=CGCTTCACACGTCTGTGTTT&k=0&no_gap=0&offset=0&limit=41
0.165 | 0.002 | cgi_end;

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