GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 05:27:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 5576 from Patent EP2148885.
HI534604.1:234-258
ATCACTGAGGCTCTTGAACAAGAAGAAGAG234AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Sequence 84362 from patent US 9029636.
HK993425.1:244-268
ATCACTGAGGCTCTTGAACAAGAAGAAGAG244AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Sequence 5576 from patent US 9271455.
HL707939.1:234-258
ATCACTGAGGCTCTTGAACAAGAAGAAGAG234AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Sequence 9209 from patent US 10184131.
MM597900.1:244-268
ATCACTGAGGCTCTTGAACAAGAAGAAGAG244AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
st62d09.y1 Gm-c1053 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1053-1314 5' similar to TR:Q9SVJ0 Q9SVJ0 HYPOTHETICAL 53.4 KD PROTEIN, mRNA sequence.
BF069998.1:330-354
ATCACTGAGGCTCTTGAACAAGAAGAAGAG330AAAGACAACGAAGAAATATCGAGGCATGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max cDNA clone: GMFL01-02-K05, 5'end.
BW651390.1:344-368
ATCACTGAGGCTCTTGAACAAGAAGAAGAG344AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max cDNA clone: GMFL01-26-N09, 5'end.
BW666971.1:330-354
ATCACTGAGGCTCTTGAACAACACCAACAG330AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max cDNA clone: GMFL01-48-L20, 5'end.
BW681989.1:354-378
ATCACTGAGGCTCTTGAACAAGAAGAAGAG354AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
GLLC962TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG987749.1:27-51
CTGAGGCTCTTGAACAAGAAGAAGAG27AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
GLLEG01TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG994790.1:352-376
ATCACTGAGGCTCTTGAACAAGAAGAAGAG352AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max cDNA, clone: GMFL01-02-K05.
AK244301.1:344-368
ATCACTGAGGCTCTTGAACAAGAAGAAGAG344AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Soybean clone JCVI-FLGm-19K3 unknown mRNA.
BT095013.1:352-376
ATCACTGAGGCTCTTGAACAAGAAGAAGAG352AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:8549715-8549739
ATCACTGAGGCTCTTGAACAAGAAGAAGAG8549715AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
Glycine max EDS5 mRNA, complete cds.
FJ528665.1:244-268
ATCACTGAGGCTCTTGAACAAGAAGAAGAG244AAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAG
GM_WBb0101B09.r GM_WBb Glycine max genomic clone GM_WBb0101B09 3', genomic survey sequence.
ED740000.1:448-472
CTTGCTTCGCGAGTTCCTTTTTCTCACCCT448GCCTCGATATTTCTTCGTTGTCTTTCTCTTCTTCTTGTTCAAGAGCCTCAGTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGACAACGAAGAAATATCGAGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGACAACGAAGAAATATCGAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.477 | 0.468 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGACAACGAAGAAATATCGAGGC&k=0&no_gap=0&offset=0&limit=50
0.544 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTCGATATTTCTTCGTTGTCTTT&k=0&no_gap=0&offset=0&limit=36
0.545 | 0.001 | cgi_end;

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