GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 01:20:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cutaneotrichosporon cavernicola HIS002 DNA, chromosome: 1.
AP028204.1:2618137-2618156
GCCCTTGATCGTGCCGCCGCGCAGCACGGC2618137AAAGGTGTGGCATCGGTAAGAGGTAATGACGTTGTCCTGAGGGGTGATCG
Cutaneotrichosporon cavernicola HIS019 DNA, chromosome: 1.
AP028212.1:2615723-2615742
GCCCTTGATCGTGCCGCCGCGCAGCACGGC2615723AAAGGTGTGGCATCGGTAAGAGGTAATGACGTTGTCCTGAGGGGTGATCG
Cutaneotrichosporon cavernicola HIS631 DNA, chromosome: 1.
AP028221.1:2613001-2613020
GCCCTTGATCGTGCCGCCGCGCAGCACGGC2613001AAAGGTGTGGCATCGGTAAGAGGTAATGACGTTGTCCTGAGGGGTGATCG
Cutaneotrichosporon cavernicola HIS641 DNA, chromosome: 1.
AP028229.1:2612860-2612879
GCCCTTGATCGTGCCGCCGCGCAGCACGGC2612860AAAGGTGTGGCATCGGTAAGAGGTAATGACGTTGTCCTGAGGGGTGATCG
Cutaneotrichosporon sp. HIS471 HIS471 DNA, chromosome: 6.
AP028243.1:2369548-2369567
CGATCACCCCGCAGGACAACGTCATCACCT2369548CTTACCGATGCCACACCTTTGCCGTGCTGCGCGGCGGCACGATCAAGGGC
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:31175821-31175840
GTAGGCCCTAATGATCTTGTCCATTACTCA31175821CTTACCGATGCCACACCTTTCGAAAATTGTCCTTCATGATCCCTCAAAAC
Malus domestica genome assembly, chromosome: 17.
OU696693.1:33436957-33436976
GTTGGCCCTAATGATCTTGTCCATTACTCA33436957CTTACCGATGCCACACCTTTCGAAAATTGTCCTGCATGATCCCTCAAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGGTGTGGCATCGGTAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGTGTGGCATCGGTAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGGTGTGGCATCGGTAAG&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CTTACCGATGCCACACCTTT&k=0&no_gap=0&offset=0&limit=46
0.116 | 0.002 | cgi_end;

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