GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 03:18:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS26036F04 KS26 Capsicum annuum cDNA, mRNA sequence.
GD133001.1:1-27
1AAAGTACATCTTTGCCTTTATTTATGTACAATACAACAACAACAACAACAACAACAA
TSA: Capsicum annuum MGMT_Contig5142, mRNA sequence.
JW055386.1:301-327
CTATACATACTGATGTAAAATCATGAATAC301AAAGTACATCTTTGCCTTTATTTATGTACAATACAACAACAACGACAACAACAACAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:1293697-1293723
CTATACATACTGATGTAAAATCATGAATAC1293697AAAGTACATCTTTGCCTTTATTTATGTACAATACAACAACAACAACAACAACAACAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:254384902-254384928
TTGTTGTTGTCTTTGTTGTTGTTGTATTGT254384902ACATAAATAAAGGCAAAGATGTACTTTGTATTCATGGTTTTACATCAGTATGTATAG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:254385081-254385107
TGGTTGTTGTTTTCGTCGTTGTTGTATTGT254385081ACATAAATAAAGGCAAAGATGTACTTTGTATTCATGGTTTTACATCAGTATGTATAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGTACATCTTTGCCTTTATTTATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGTACATCTTTGCCTTTATTTATGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGTACATCTTTGCCTTTATTTATGT&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=ACATAAATAAAGGCAAAGATGTACTTT&k=0&no_gap=0&offset=0&limit=47
0.200 | 0.001 | cgi_end;

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