GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 20:23:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:56032879-56032903
AAGAAACTACATAGAAGTGAAGTTTTTCAT56032879AACAAAATACTAAACTATAGCAAAGAATATAAATTTAGTTTGCTTGAAACTTAAC
Lotus japonicus genomic DNA, chromosome 3, clone: LjT14G02, TM0080.
AP004533.1:37943-37967
GTTAAGTTTCAAGTGAACTAAATTTATATT37943CTTTGCTATAGTTTAGTATTTTGTTCTGAAAAGCTTCACTTCTTTTTAGTTTCTT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:63347350-63347374
GTTAAGTTTCAAGTGAACTAAATTTATATT63347350CTTTGCTATAGTTTAGTATTTTGTTTTAAAAAACATCACCTCTATCTAGTTTCTT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:7200323-7200347
GTTAAGTTTCAAGTGAACTAAATTTATATT7200323CTTTGCTATAGTTTAGTATTTTGTTCTGAAAAGCTTCACTTCTTTTTAGTTTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACAAAATACTAAACTATAGCAAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACAAAATACTAAACTATAGCAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=AACAAAATACTAAACTATAGCAAAG&k=0&no_gap=0&offset=0&limit=50
0.108 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTGCTATAGTTTAGTATTTTGTT&k=0&no_gap=0&offset=0&limit=49
0.110 | 0.002 | cgi_end;

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