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Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 03:49:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KN0AAN3AH12RM1 EHR (Terol) Citrus sinensis x Citrus trifoliata cDNA 5', mRNA sequence.
DY259471.1:473-491
TTCCTTGAATGAAATCAGGACTTTGCATTG473AACAGAAGTAGGATGATGCACTTGTAACTTTAAAATTAGTGCTGAATGG
KN0AAN3AH12RM1 EHR Citrus clementina cDNA clone KN0AAN3AH12, mRNA sequence.
FC876801.1:480-498
TTCCTTGAATGAAATCAGGACTTTGCATTG480AACAGAAGTAGGATGATGCACTTGTAACTTTAAAATTAGTGCTGAATGG
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:8197726-8197744
TTCCTTGAATGAAATCAGGACTTTGCATTG8197726AACAGAAGTAGGATGATGCACTTGTAACTTTAAAATTAGTGCTGAATGG
Heterobilharzia americana genome assembly, chromosome: 3.
OX104105.1:46654497-46654515
ATGACACTTTCCACCAACGCAAAAATTAGG46654497AACAGAAGTAGGATGATGCTAAGCTAAACAAGAAGAGTATAAGAGAAGA
Heterobilharzia americana genome assembly, chromosome: 3.
OX104129.1:47695486-47695504
ATGACACTTTCCACCAACGCAAAAATTAGG47695486AACAGAAGTAGGATGATGCTAAGCTAAACAAGAAGAGTATAAGAGAAGA
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:240023627-240023645
TGGCATACTAAAGCCATCATAAAATGCAGA240023627GCATCATCCTACTTCTGTTCAGACAGGGATAGCTTCAACCTTGTATTAT
Rana temporaria genome assembly, chromosome: 2.
LR991681.1:109981492-109981510
AGACATACACCAAACACTTTTTATGCAATG109981492GCATCATCCTACTTCTGTTCTAGTAATATTGGCTTGTAGCAAGCCCTAC
Citrus reshni microsatellite DNA locus mCrCIR02H05.
HE801214.1:145-163
CCATTCAGCACTAATTTTAAAGTTACAAGT145GCATCATCCTACTTCTGTTCAATGCAAAGTCCTGATTTCATTCAAGGAA
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:512375-512393
CCATTCAGCACTAATTTTAAAGTTACAAGT512375GCATCATCCTACTTCTGTTCAATGCAAAGTCCTGATTTCATTCAAGGAA
Stomoxys calcitrans genome assembly, chromosome: 4.
OY720438.1:97340921-97340939
TCTGGATGTTTCAACGGTAGGAACTAGCAG97340921GCATCATCCTACTTCTGTTCCTGTGGTATCACAATGGACGAAAACGTCG

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