GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 09:46:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Laspeyria flexula genome assembly, chromosome: Z.
LR989949.1:9650779-9650798
AATGCAAATAGTTTAATAAATATCTAAAAT9650779AACATTGCATTTCATGCTGATTGACGTCAATTAATTATGATGACAGATCT
Microchrysa polita genome assembly, chromosome: 4.
OX454418.1:13641808-13641827
ATTGAACAGTTTCGAAAAAAAAATATACTT13641808AACATTGCATTTCATGCTGATATATAACCACCACTTTAGATGCAAAATCA
Onychomys arenicola genome assembly, chromosome: 11.
OX460357.1:1423131-1423150
TGGTAGAACAGAGGCCAACTATACATTCAC1423131TCAGCATGAAATGCAATGTTTGGGAGTAACAGGAGAGGATCAGATAAGGC
Onychomys arenicola genome assembly, chromosome: 11.
OX460452.1:1419804-1419823
TGGTAGAACAGAGGCCAACTATACATTCAC1419804TCAGCATGAAATGCAATGTTTGGGAGTAACAGGAGAGGATCAGATAAGGC
Salmo trutta genome assembly, chromosome: 2.
LR584445.1:55272586-55272605
AGTTTTAGCGCGCCCTTAGGCAGCGTATTG55272586TCAGCATGAAATGCAATGTTGCTACATACGCTGCTCACAGAACTATGATG
Coregonus sp. 'balchen' genome assembly, chromosome: 1.
LR778253.1:14306111-14306130
AATTTTAGCACGCCCTTAGGCAGCATATTG14306111TCAGCATGAAATGCAATGTTCCTACAAATGCTGCTCACAGAACTATGATG
Chionographis japonica genome assembly, chromosome: 8.
OX393556.1:34283914-34283933
ATGGTACATGTTTACATATACTAGTCTGCA34283914TCAGCATGAAATGCAATGTTTGAAGTTGATGCAGTTGATGCACAAAGATC
Aelia acuminata genome assembly, chromosome: 1.
OU426978.1:205649471-205649490
GATCAATAATTAAATTAGGAGGACAACTGC205649471TCAGCATGAAATGCAATGTTGTACAATACTATTGTACAAGGTGTAATGGT
Trichobilharzia szidati genome assembly, chromosome: 5.
OX235275.1:17190503-17190522
AAAGAGTACTTTCGATACAATGTGGAATTT17190503TCAGCATGAAATGCAATGTTGAATCTAATTTTCTCTTTAGATTAGATAAT
Ceriagrion tenellum genome assembly, chromosome: 12.
OY720644.1:28729391-28729410
CCGAGTGGATCTTTTAATACGATGCAGGAA28729391TCAGCATGAAATGCAATGTTTTGCAGAAATGAGAGGGGTTACATGTTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACATTGCATTTCATGCTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACATTGCATTTCATGCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=AACATTGCATTTCATGCTGA&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGCATGAAATGCAATGTT&k=0&no_gap=0&offset=0&limit=48
0.148 | 0.005 | cgi_end;

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