GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 19:42:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sylvilagus floridanus genome assembly, chromosome: 17.
OX463239.1:24231856-24231875
GAAGACTAGATGTTTTCACTAAAAAGCAAA24231856AACCAAAAACATTCCCACCACCACCAGTAACAACAGAGGTGTGTTTATCA
Sequence 47 from Patent WO2011023571.
JA169934.1:21-40
ATGTGCCTGGGGCTCCAAGA21AACCAAAAACATTCCCACCATTCTTAACTTCACTCACTTACAAATCACAA
so36e06.y1 Gm-c1039 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1039-59 5' similar to TR:Q39127 Q39127 TINY MRNA, mRNA sequence.
BE209844.1:29-48
ACGAGGGTATGTGCCTGGGGCTCCAAGA29AACCAAAAACATTCCCACCATTCTTAACTTCACTCACTTACAAATCACAA
JGI_ACBU4670.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU4670 5', mRNA sequence.
EH261425.1:20-39
TGTGCCTGGGGCTCCAAGA20AACCAAAAACATTCCCACCATTCTTAACTTCACTCACTTACAAATCACAA
Glycine max clone HN_CCL_165 AP2-EREBP transcription factor (Glyma08g21650.1) mRNA, partial cds.
KT031081.1:21-40
ATGTGCCTGGGGCTCCAAGA21AACCAAAAACATTCCCACCATTCTTAACTTCACTCACTTACAAATCACAA
Chrysanthemum makinoi genome assembly, chromosome: 4.
OU343220.1:129088655-129088674
ACCCACTCCACCACCAAGAAAATCTCACAT129088655AACCAAAAACATTCCCACCAAACTCAAAGATTTCCATCACTACAAGCCAT
Leptopterna dolabrata genome assembly, chromosome: 9.
OX940983.1:33429010-33429029
TAATGACCTCAACAACACATTTTATACTTA33429010AACCAAAAACATTCCCACCAAATGAGTCAATGAATGGATGTGTCGATTCA
Meiosimyza decipiens genome assembly, chromosome: 3.
OY804260.1:19013279-19013298
TTCGCTCTACTTATGTGAACATTTTTAGAA19013279AACCAAAAACATTCCCACCAATTATGTTGCTTTAACATACGGAACATTTT
Hyperoplus immaculatus genome assembly, chromosome: 21.
OX442369.1:17421098-17421117
TGAGCACCTAACACAAAGTACAGCGGAGGC17421098TGGTGGGAATGTTTTTGGTTTTGTAGGAATTTGAACATAAACTGAATGAA
JP 2009538603-A/289: Modified Microbial Nucleic Acid.
FV536310.1:4420501-4420520
TGGTGGTTGTGGTGGTGGTGGTTTTTTGGG4420501TGGTGGGAATGTTTTTGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGGGTT
JP 2009538603-A/290: Modified Microbial Nucleic Acid.
FV536311.1:4420501-4420520
TGGTGGTTGTGGTGGTGGTGGTTTTTTGGG4420501TGGTGGGAATGTTTTTGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGGGTT
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:16537663-16537682
TTGTGATTTGTAAGTGAGTGAAGTTAAGAA16537663TGGTGGGAATGTTTTTGGTTTCTTGGAGCCCCAGGCACATACATATAATA
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737533.1:33000796-33000815
CCTAAAGTCAAATGCTAAATTAATTTTATT33000796TGGTGGGAATGTTTTTGGTTGCACGAAACATTCTTGGCGTGCAATGTACA
Apoderus coryli genome assembly, chromosome: 6.
OU452203.1:9812770-9812789
TGTATATTTATAGTTACATTAAATTCAATT9812770TGGTGGGAATGTTTTTGGTTTTCTGAAAATTCAAAGAAAAATTTCACAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACCAAAAACATTCCCACCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCAAAAACATTCCCACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.247 | 0.238 | search_plus_done; http://172.18.8.135:50400/match?q=AACCAAAAACATTCCCACCA&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.064 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTGGGAATGTTTTTGGTT&k=0&no_gap=0&offset=0&limit=42
0.315 | 0.004 | cgi_end;

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