GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-16 08:25:04, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MUSLF26TF MUSL Musa acuminata cDNA 5', mRNA sequence.
FF558495.1:469-486
TTGAACAAGCAGAGAATTCCTTTGACAGAC469AACTTGGTCGTTGAGCAGGGCTTGGGGAAACATGGTATCATCTGTGTT
MUSRU89TF MUSR Musa acuminata cDNA 5', mRNA sequence.
FF561771.1:52-69
TTGAACAAGCAGAGAATTCTTTTGACGGAC52AACTTGGTCGTTGAGCAGGGCTTGGGAAAACATGGTATCATCTGTGTT
MACVLIMFLS024A_C06 MACVLIMFLS Musa acuminata AAA Group cDNA clone MACVLIMFLS024A_C06 5', mRNA sequence.
JK545562.1:309-326
TTGAACAAGCAGAGAATTCCTTTGACAGAC309AACTTGGTCGTTGAGCAGGGCTTGGGGAAACATGGTATCATCTGTGTN
TSA: Musa acuminata AAA Group Unigene81115_NK1 mRNA sequence.
JV394740.1:45-62
TTGAACAAGCAGAGAATTCCTTTGACAGAC45AACTTGGTCGTTGAGCAGGGCTTGGGGAAACATGGTATCATCTGTGTT
Brassica oleracea clone BOT01-94D07, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC240132.1:6223-6240
GAGCTGGGACAGCAACGTTTTCAAGTGCTC6223AACTTGGTCGTTGAGCAGGATCTATGTACTCTGCTACGTTGCTGTGTT
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:65853487-65853504
GAGCTGGGACAGCAACGTTTTCAAGTGCTC65853487AACTTGGTCGTTGAGCAGGATCTATGTACTCTGCTACGTTGCTGTGTT
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome B05.
CP163472.1:57924536-57924553
GTGGAGCTACTGCAACGTTTTCAAGTGCTC57924536AACTTGGTCGTTGAGCAGATCTCTGTTGCTGTTTATATATCTTTTGTC
Raphanus sativus genome assembly, chromosome: 5.
LR778314.1:12414329-12414346
GAGCTGCGACAGCAACGTTTTCAAGTGCTC12414329AACTTGGTCGTTGAGCAGATACATGTTAAATGTGTGTGTTGTTGTATA
Raphanus sativus genome assembly, chromosome: 7.
OY743213.1:4396201-4396218
GTGGTGCTACTGCAACGTTTTCAAGTGCTC4396201AACTTGGTCGTTGAGCAGATCAATATTGCTGTAATATTCTCTCGTTGC
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 4.
OZ077127.1:73117350-73117367
CATGAGCGCCAGGTTCGGTTATTTTACCAG73117350AACTTGGTCGTTGAGCAGGGGACTCTGGCCACCACCGTGGATGGTATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:57290195-57290212
CACGAGCGCCAGGTTCGATTATTTTACCAG57290195AACTTGGTCGTTGAGCAGGGTACTATTGCCACCACCGTGGATGGCATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:70892449-70892466
CACGAGCGCCAGGTTCAGTTATTTTACCCG70892449AACTTGGTCGTTGAGCAGGGTACTCTTGCCACCACCGTGGATGGCATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 7.
OZ077130.1:129820262-129820279
CACGAGCGCCAGGTTCGATTATTTTATCAG129820262AACTTGGTCGTTGAGCAGGGTACTCTTGCCACCATCGTGGATGGCATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 9.
OZ077132.1:91677722-91677739
CACGAGCGCCAGGTTCAGTTATTTTACCAG91677722AACTTGGTCGTTGAGCAGGGTACTCTTGCCACCAACGTGGATGGCATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 9.
OZ077132.1:98260735-98260752
CACGAGCGCCAGGTTCGGTTATTTTACCAG98260735AACTTGGTCGTTGAGCAGGGTATTCTTACCACCACCGTGGATGGCATT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 16.
OZ077139.1:13503614-13503631
CACGAGCGCCAAGTTTGGTTATTTTACCAG13503614AACTTGGTCGTTGAGCAGGGGTACTCTTGTCACCACCTGTGGATGGCA
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 16.
OZ077139.1:91711439-91711456
CACGAGCGCCAGGTTCGGTTATTTTACCAG91711439AACTTGGTCGTTGAGCAGGATACTCTTGCCACCACCGTGGATGGCATT
Mucilaginibacter daejeonensis strain KACC 14964 chromosome, complete genome.
CP086068.1:1227187-1227204
CTCGCCGTACTGATCACATTCACCTTATCG1227187AACTTGGTCGTTGAGCAGCCGTGCGACACGGAGCTGGCCTGTGAGGGT
Steromphala cineraria genome assembly, chromosome: 14.
OU744733.1:40602071-40602088
TGGCGTCATCCGCAAACTTGGTCATCCACA40602071AACTTGGTCGTTGAGCAGGTTGAACTATAACTAATGCAATCGTTAGTG
Euclidia mi genome assembly, chromosome: 18.
OX123198.2:4704803-4704820
TGAATCGAGCAAATATAAAATGTTGTATGT4704803AACTTGGTCGTTGAGCAGTGCTTTATTTGGCGCCACTCTTATAATGTT
Meconema thalassinum genome assembly, chromosome: 7.
OX336395.1:85127127-85127144
ACAATTAACTCCTGTCATTTCGCTAAACTC85127127AACTTGGTCGTTGAGCAGGTCAATAATTGAAATGATTAAATAGTAATA
Nomada flava genome assembly, chromosome: 4.
OX637904.1:8683565-8683582
GAGTTTCTTTCCATGGACGCACATACAGTA8683565AACTTGGTCGTTGAGCAGGTTTTAATAGAATTGATGTATTGACACCGT
Nomada hirtipes genome assembly, chromosome: 7.
OX637922.1:3923512-3923529
GAGTTTCTTTCCATGGACGCACATACAGTA3923512AACTTGGTCGTTGAGCAGGTTTTAATAGAATTGATGTATCGACACCGT
Tetanocera ferruginea genome assembly, chromosome: 1.
OY282640.1:33530224-33530241
ACTACAGAACGTTCTACTATACAAAGCAGA33530224AACTTGGTCGTTGAGCAGCTCTGATAACAGGACGTTGGAAGCCTTGGA
Nomada ferruginata genome assembly, chromosome: 4.
OY757216.1:6923182-6923199
GAGTTTCTTTTCATGGACGCACATACAGTA6923182AACTTGGTCGTTGAGCAGGTTTTAATAGAATTGATGTATTGACACCGT
Hermodice carunculata genome assembly, chromosome: 19.
OZ026630.1:31201350-31201367
TGAAGGACATCTGGCTACCGTCCCTGCGAA31201350AACTTGGTCGTTGAGCAGTTTTTCAGCATGACAATGACCCATAGCATC
Cyphastrea salae genome assembly, chromosome: 1.
OZ077363.1:45590575-45590592
TTCAGACTGTCGCTAATCTTGTGGCAAACT45590575AACTTGGTCGTTGAGCAGGAATAAAAACTTAAAAAGAGCAAAAACAGA
Haplosyllis sp. GHC0000112 genome assembly, chromosome: 5.
OZ221017.1:58563053-58563070
TATATGAATACACTTTTTGCTGGAGTTTCA58563053AACTTGGTCGTTGAGCAGGTAAAATCCATGTTCATATGGACCTTCGAT
JP 2019184500-A/32: METHOD OF SCREENING THERAPEUTIC AGENT FOR HEREDITARY BREAST AND OVARIAN CANCER.
MB470044.1:89800-89817
TTGAGCATTTGGGCTGACGATTGGGTCGAG89800CTGCTCAACGACCAAGTTGTACAGGTTATCGAGATGCCATCTGAAAAT
BONMN50TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONMN50, genomic survey sequence.
BZ426379.1:467-484
AACACAGCAACGTAGCAGAGTACATAGATC467CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A02, pooled multiple clones, *** SEQUENCING IN PROGRESS ***, 92 unordered pieces.
AC234727.1:94192-94209
AAAGAATATATAACACAGCAAACAGAGATC94192CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A02 clone KBrH086H16, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC234758.1:123820-123837
AAAGAATATATAACACAGCAAACATAGATC123820CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Raphanus sativus DNA, microsatellite:locus REL-13, cultivar: Harufuku.
AB630376.1:149-166
ACACACACACACATTTAACAACTAGTGTAT149CTGCTCAACGACCAAGTT
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:1908791-1908808
ACAAGAATATATAACACAGCAACAGAGATC1908791CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Musa acuminata subsp. malaccensis isolate AA chromosome 11.
CP126380.1:6616745-6616762
AACCCACTGGCAATGCATCCCACAGCATAC6616745CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Musa acuminata subsp. malaccensis isolate AA chromosome 22.
CP126391.1:6542530-6542547
AACCCACTGGCAATGCATCCCACAGCATAC6542530CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Brassica napus cultivar Xiang5A chromosome 2.
CP151897.1:660190-660207
ACAAGAATATATAACACAGCAACAGAGATC660190CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Brassica napus cultivar Xiang5A chromosome 12.
CP151907.1:558893-558910
AACACAGCAACGTAGCAGAGTACATAGATC558893CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome A05.
CP163465.1:4478757-4478774
GACAAAAGATATATAAACAGCAACAGAGAT4478757CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCAGTAGCTCCAC
Brassica napus genome assembly, chromosome: A02.
HG994356.1:1702707-1702724
AAAAGAATAAATAACACAGCAACATATATC1702707CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Brassica napus genome assembly, chromosome: C02.
HG994366.1:2457505-2457522
AACACAGCAACGTAGCAGAGTACATAGATC2457505CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A11.
HG996475.1:6326226-6326243
AACCCACTGGCAATGCATCCCACAACATAC6326226CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Brassica rapa genome, scaffold: A02.
LR031573.1:1722881-1722898
ACACAGCAACATAGTCAGAGTACATAGATC1722881CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:2541264-2541281
AACACAGCAACGTGGCAGAGTACATAGATC2541264CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Raphanus sativus genome assembly, chromosome: 8.
LR778317.1:28583183-28583200
GCAACGAGAGAATATTACAGCAATATTGAT28583183CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCAGTAGCACCAC
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:1753145-1753162
ACACAGCAACATAGTCAGAGTACATAGATC1753145CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCCCAGCTC
Musa schizocarpa genome assembly, chromosome: S11.
LS990925.1:7047303-7047320
AACCCACTGGCAATGCATCCCACAACATAC7047303CTGCTCAACGACCAAGTTGTCTGTCAACGGAATTCTCTGCTTGTTCAA
Geum urbanum genome assembly, chromosome: 6.
OX327002.1:65981494-65981511
TTATGCTCGTGCTCACCTACAACTCCTCTA65981494CTGCTCAACGACCAAGTTAGGGCTGAAATATGAAAAAAATGAGAAACA
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737482.1:483922931-483922948
GGTAATCTCATTGTTCCTTTTGCTACTAAT483922931CTGCTCAACGACCAAGTTATGTGAATAAAAGTAACATAATCATTGCAT
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY740911.1:483922931-483922948
GGTAATCTCATTGTTCCTTTTGCTACTAAT483922931CTGCTCAACGACCAAGTTATGTGAATAAAAGTAACATAATCATTGCAT
Raphanus sativus genome assembly, chromosome: 2.
OY743208.1:31203809-31203826
TATACAACAACACACACATTTAACATGTAT31203809CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCTGTCGCAGCTC
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 1.
OZ077124.1:95513958-95513975
AATGCCATCCACGGTGGTGGCAAGAATACC95513958CTGCTCAACGACCAAGTTTTGGTAAAATAATCGAACCTGGCGCTCGTG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 4.
OZ077127.1:45928196-45928213
AATTCCATCCACGGTGGTGGCAAGCATACC45928196CTGCTCAACGACCAAGTTCTGGTAAAATAACCAAACCTGACGCTCATG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 4.
OZ077127.1:61188210-61188227
AATGCCATCCACGGTGGTGGCCAGAGTCCC61188210CTGCTCAACGACCAAGTTCTGGTAAAATAACCGAACCTGGCGCTCATG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:27903563-27903580
AATGCCATCCACGGTAGTGGCAAGAGTACC27903563CTGCTCAACGACCAAGTTCTGGTAAAATAACCGAACCTGGCGCTCGTG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:124388193-124388210
AATGCCATCCACGGTGGTGGCAAGAGTACC124388193CTGCTCAACGACCAAGTTCTGGTAAAATAACTGAACCTGGCGCTCGTG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 10.
OZ077133.1:90815846-90815863
AATGCCATCCATGGTGGTGGCAAGCATACC90815846CTGCTCAACGACCAAGTTCTGGTAAAATAACCGAACCTGGCGCTCGTG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 13.
OZ077136.1:87951489-87951506
AATGCCATCCACGGTGGTGGCAAGAGTACC87951489CTGCTCAACGACCAAGTTCTGGTAAAATAACCGAACCTGGCGCTCGTG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 14.
OZ077137.1:4660482-4660499
AATGTCATCCACGGTGGTGGCAAGAGTACC4660482CTGCTCAACGACCAAGTTCTGGTAAAATAACTGAACCTGACGCTCGTG
Brassica nigra genome assembly, chromosome: 1.
OZ173171.1:3115328-3115345
AAGTACATAAAAAAAACAACAGAGATCTAT3115328CTGCTCAACGACCAAGTTGAGCACTCGAAAACGTTGCCGTCGCAGCTC
Brassica nigra genome assembly, chromosome: 2.
OZ173172.1:35462462-35462479
GCATATACAACAACAACAACAAAGATCTGC35462462CTGCTCAACGACCAAGTTGAGCACTTGAAAACGTTGCAGTAGCACCAC
Brassica nigra genome assembly, chromosome: 3.
OZ173173.1:39824213-39824230
GCATACCAAACAGTCAAGAACAACATGTAT39824213CTGCTCAACGACCAAGTTGGGCACTTGAAAACGTTGCCGTCGCAGCTC
Musa banksii genome assembly, chromosome: 11.
OZ184662.1:6280133-6280150
AACCCACTGGCAATGCATCCCACAACAAAC6280133CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Musa acuminata var. zebrina genome assembly, chromosome: 11.
OZ184685.1:6474945-6474962
AACCCACTGGCAATGCATCCCACAACATAC6474945CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Musa hybrid cultivar genome assembly, chromosome: 11.
OZ185490.1:6889219-6889236
AACCCACTGGCAATGCATCCCACAACATAC6889219CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Musa hybrid cultivar genome assembly, chromosome: 11.
OZ185502.1:6457347-6457364
AACCCACTGGCAATGCATCCCACAACAAAC6457347CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 11.
OZ193596.1:7058458-7058475
AACCCACTGGCAATGCATCCCACAACATAC7058458CTGCTCAACGACCAAGTTGTCTGTCAAAGGAATTCTCTGCTTGTTCAA
Cydia pomonella breed lab01 chromosome M22.
CP137788.1:12671212-12671229
AAGTTTGATGAATTAAATTTTACATGCGTT12671212CTGCTCAACGACCAAGTTCTACATTCTGCTCAAGTAAGAGTAGAGCAT
Steromphala cineraria genome assembly, chromosome: 14.
OU744733.1:40699818-40699835
CACTAACGATTGCATTAGTTATAGTTCAAC40699818CTGCTCAACGACCAAGTTTGCGGATTATGCCGCAATTGTTGGAAAACA
Nebria brevicollis genome assembly, chromosome: 3.
OX122900.1:8963232-8963249
AACTACCACCAATAGTTGACCGATGGCTAG8963232CTGCTCAACGACCAAGTTCACTGATGCCAAAATGCTATAGCCCCAATC
Meconema thalassinum genome assembly, chromosome: 7.
OX336395.1:63719167-63719184
TATTACTATTTAATCATTTCAATTATTGAC63719167CTGCTCAACGACCAAGTTGAGTTTAGCGAAATGATAGGAGTTAATTGT
Eristalinus aeneus genome assembly, chromosome: 1.
OY019130.1:85056112-85056129
AAATTCTGTGACTTTTCTTCATTCCATTTA85056112CTGCTCAACGACCAAGTTGAAGAACAGCCCAAAGGTCCACCCTCCGAT
Ormia ochracea genome assembly, chromosome: 5.
OY727109.1:45590876-45590893
TAAGCCAGTCTTTAAAAGTGCAGCTCTTTT45590876CTGCTCAACGACCAAGTTCTTAAGTCGTCTTACATTGTTACTTACTGC
Cyphastrea salae genome assembly, chromosome: 6.
OZ077368.1:13528306-13528323
TCTGTTTTTGCTCTTTTTAAGTTTTTATTC13528306CTGCTCAACGACCAAGTTAGTTTGCCACAAGATTAGCAACAGTCTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACTTGGTCGTTGAGCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTTGGTCGTTGAGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.311 | 0.302 | search_plus_done; http://172.18.8.135:50800/match?q=AACTTGGTCGTTGAGCAG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.116 | search_minus_done; http://172.18.8.135:50800/match?q=CTGCTCAACGACCAAGTT&k=0&no_gap=0&offset=0&limit=22
0.458 | 0.032 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).