GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 02:28:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ltu01b_170_A02_C012.g1 Liriodendron Flower Bud Library Liriodendron tulipifera cDNA clone 122MzL_A04 5', mRNA sequence.
FD497533.1:375-395
AAAAGACAAAAAGGGAAAAGTAAAAAAGAA375AAGAAAGATTTGCTGGCAGAGTATGATGGATGATATGCAGCCATTAATAAA
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:294687-294707
TGTATAGAGAAACAAATAATTACTAAAAAT294687AAGAAAGATTTGCTGGCAGAGTTATAAAAAAAAAAGAAAAAAGAATCATAG
IC0AAA40AH07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276100.1:378-398
CTATGATTCTTTTTTCTTTTTTTTTTATAA378CTCTGCCAGCAAATCTTTCTTATTTTTAGTAATTATTTGTTTCTCTATACA
IC0AAA40AH07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA40AH07, mRNA sequence.
FC898969.1:378-398
CTATGATTCTTTTTTCTTTTTTTTTTATAA378CTCTGCCAGCAAATCTTTCTTATTTTTAGTAATTATTTGTTTCTCTATACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGAAAGATTTGCTGGCAGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAAAGATTTGCTGGCAGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=AAGAAAGATTTGCTGGCAGAG&k=0&no_gap=0&offset=0&limit=50
0.334 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGCCAGCAAATCTTTCTT&k=0&no_gap=0&offset=0&limit=48
0.336 | 0.001 | cgi_end;

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