GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 15:50:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pipistrellus genome assembly, chromosome: 6.
LR862362.1:32524359-32524378
AATAAATAATAGAGGGTTCTGGAAGACTGA32524359AAGGCAGAGGATTCACCAGAGGACCTAATAGCTATGGGAAGCATATCTTT
Mastacembelus armatus genome assembly, chromosome: 24.
LR535856.1:13445590-13445609
TGAATCATATTCATATTTGCAAATAAATTA13445590AAGGCAGAGGATTCACCAGATGACTTCTTAAACTAGCAAGGAACAGTAAT
Geotrypetes seraphini genome assembly, chromosome: 11.
LR699156.1:125743922-125743941
GAAAGAGCCATTTGTAAAGAACCTCTTTCC125743922AAGGCAGAGGATTCACCAGAGATACTACCACTTCTACCACTAAAATAGAC
Microcaecilia unicolor genome assembly, chromosome: 10.
LR594641.1:4361625-4361644
AACTCCCAAATTAAAAGTAAAAGCAGAAGC4361625TCTGGTGAATCCTCTGCCTTAGAAAAGCTAAGAAAGCAAATAGAATGTTA
Solanum pennellii chromosome ch08, complete genome.
HG975447.1:30494823-30494842
CCCTTGAAGAAGATTCTAATTTGACCAAGC30494823TCTGGTGAATCCTCTGCCTTTGACTATGGCTTCCCATCTAAGGGATTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGGCAGAGGATTCACCAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGCAGAGGATTCACCAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGCAGAGGATTCACCAGA&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGGTGAATCCTCTGCCTT&k=0&no_gap=0&offset=0&limit=47
0.118 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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