GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 22:46:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RCG01572.
DE213370.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG02403.
DE214032.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG02642.
DE214221.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG02692.
DE214257.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG03022.
DE214522.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG03082.
DE214576.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG03613.
DE214999.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG03812.
DE215175.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG03918.
DE215261.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG01017.
DE246674.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG01202.
DE246813.1:5-26
CTCT5AAGGGTGTTGTTTCTGTTGTTGATGCCTAACACTGTGTTGGTGTTGTTGTTG
Trifolium pratense DNA, clone:RCG01440.
DE213261.1:161-182
CAACAACAACACCAACACAATGTTAGGCAT161CAACAACAGAAACAACACCCTTAGAG
Trifolium pratense DNA, clone:RCG01536.
DE213339.1:161-182
CAACAACAACACCAACACAGTGTTAGGCAT161CAACAACAGAAACAACACCCTTAGAG
Trifolium pratense DNA, clone:RCG02064.
DE213765.1:161-182
CAACAACAACACCAACACAGTGTTAGGCAT161CAACAACAGAAACAACACCCTTAGAG
Trifolium pratense DNA, clone:RCG03574.
DE214967.1:161-182
CAACAACAACACCAACACAGTGTTAGGCAT161CAACAACAGAAACAACACCCTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGGGTGTTGTTTCTGTTGTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGGTGTTGTTTCTGTTGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.253 | 0.244 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGGTGTTGTTTCTGTTGTTG&k=0&no_gap=0&offset=0&limit=50
0.379 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=CAACAACAGAAACAACACCCTT&k=0&no_gap=0&offset=0&limit=39
0.381 | 0.003 | cgi_end;

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