GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:45:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rangifer tarandus platyrhyncus genome assembly, chromosome: 19.
OX596103.1:57038590-57038609
GTGTCGGCGCCTAGGGAACAAGATGAAGGG57038590AATAGGTTCCAGAATGAAGCTATGGTATAGACTGCTGATTGCCCCTAATT
TSA: Cajanus cajan cultivar Asha contig10382.Asha mRNA sequence.
EZ658246.1:207-226
CCTATACTTTCATAAACAAGAAAAACTGAA207AATAGGTTCCAGAATGAAGCCAGCAGAAAAGGAACGAGATGATGATGATG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 18.
OX459954.2:6799267-6799286
AATTAGGGGCAATCAGCAGTCTATACCATA6799267GCTTCATTCTGGAACCTATTCCCTTCATCTTGTTCCCTAGGCGCCGACAC
Salmo trutta genome assembly, chromosome: 31.
LR584423.1:39397023-39397042
CAGGATCTGGCACCTGCCAGTTTTAGGACT39397023GCTTCATTCTGGAACCTATTTGACAGGATGTAATGTTTGCAATGTAAACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATAGGTTCCAGAATGAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATAGGTTCCAGAATGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=AATAGGTTCCAGAATGAAGC&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCATTCTGGAACCTATT&k=0&no_gap=0&offset=0&limit=48
0.123 | 0.001 | cgi_end;

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