GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-13 03:44:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

VBL1_2_I05_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis hypogaea cDNA, mRNA sequence.
GO263087.1:7-26
GGGAGA7AATCGGCCAAGGTATGGTTTCGATTTCTTGTAGTTAATATATAATATTGT
NRL_008670 Root cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocpnra0_0106_F09.ab1, mRNA sequence.
JK186779.1:344-363
TTGAATAAATTGCTTGGGTCGTTACGTGGA344AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTAT
RILL_007408 Ralstonia solanacearum challenged leaf cDNA library of peanut (Arachis hypogaea) Arachis hypogaea cDNA clone ocprla0_0088_E11.ab1, mRNA sequence.
JK196342.1:322-341
TTGAATAAATAACTTTGGTCGTTACGTGAA322AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTCT
Arachis hypogaea DNA, clone: SAAC0702H10.
DH962618.1:431-450
CTAAGTGGGTTGTCTTGGATTATACGTGAA431AATCGGCCAAGGTATGGTTTTGGTTTCTCGTATTTAATATATAATGTCTT
Arachis hypogaea DNA, clone: SAAC0706P24.
DH963223.1:242-261
CCTTGTGGGTTGCCTTGGGTAATACTTGGA242AATCGGCCAAGGTATGGTTTAGGTTTCGCGTATTTATATATAATGTTCTG
Arachis hypogaea DNA, clone: SAAC11P14.
DH964904.1:133-152
CTTTTGGTGGTGTCTTGGGTAATACGTGAA133AATCGGCCAAGGTATGGTTTATGTTTCTCGTATGTAATATATAATGTCGT
Arachis hypogaea DNA, clone: KIAC10K03.
DH965045.1:410-429
TTTGGTGATTTGCCTCGAGAAATACGTGGA410AATCGGCCAAGGTATGGTTTAGGTTTCACGTATTTAATATATAATATTCT
AdH1147-CPY2-G16TR AdH1 Arachis duranensis genomic clone AdH1147-CPY2-G16, genomic survey sequence.
FI287414.1:257-276
TCAAAATTTGGTGTTTGGGTGCATATTGGG257AATCGGCCAAGGTATGGTTTTGGTTTTTTCTATGTAATATATAATATTTC
AdH1030-CPY2-J1TR AdH1 Arachis duranensis genomic clone AdH1030-CPY2-J1, genomic survey sequence.
FI289786.1:65-84
TTGAATAAATAGCTTTGGTCGTTACATGGA65AATCGGCCAAGGTATGGTTTATGTTTCTTGCATTTAATATATAATATTCT
AdH1156-CPY2-L18TF AdH1 Arachis duranensis genomic clone AdH1156-CPY2-L18, genomic survey sequence.
FI294043.1:183-202
TTAAATAAATTGCTTTGGTTGTTACATGGA183AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTCT
AdH1172-CPY2-M11TR AdH1 Arachis duranensis genomic clone AdH1172-CPY2-M11, genomic survey sequence.
FI303735.1:330-349
GACTCAAAGTGGTATTTTGTGCAAATTGGG330AATCGGCCAAGGTATGGTTTCAGTTTTCTTTATCTAGTATGTAATGTTTC
AdH1180-CPY2-A1TF AdH1 Arachis duranensis genomic clone AdH1180-CPY2-A1, genomic survey sequence.
FI308283.1:132-151
GTTTGAGCTTGGTGTTTTGAGTTGCATGAG132AATCGGCCAAGGTATGGTTTCGGTTTCCTCTATGTAATATGTAATGTTTC
AdH1176-CPY2-F5TR AdH1 Arachis duranensis genomic clone AdH1176-CPY2-F5, genomic survey sequence.
FI309759.1:332-351
TACTCAAAGTGGTATTTTGTGCTATTTGGG332AATCGGCCAAGGTATGGTTTCAGTTTTCTTTATCTAGTATGTAATGTTTC
AdH1182-CPY2-P1TF AdH1 Arachis duranensis genomic clone AdH1182-CPY2-P1, genomic survey sequence.
FI315921.1:644-663
TAGTTGAAAGCTCATTTGGTTCATAAAGGA644AATCGGCCAAGGTATGGTTTCGGTTTTCTCTATGTAGTATATAATAATCA
AdH1177-CPY2-B10TR AdH1 Arachis duranensis genomic clone AdH1177-CPY2-B10, genomic survey sequence.
FI317363.1:41-60
TCAAGCTTTTGGTGTTTTGCACACATTGAG41AATCGGCCAAGGTATGGTTTCGATTTCCTTTATTTAATATGTAATGTTTC
AdH1172-CPY2-G6TF AdH1 Arachis duranensis genomic clone AdH1172-CPY2-G6, genomic survey sequence.
FI317487.1:512-531
TGAACTTTGGTGGTTTTGAGCTTAGGGTAG512AATCGGCCAAGGTATGGTTTTTGTTTTCTAGTAAATAATATGTAATGTCG
AdH1172-CPY2-L20TF AdH1 Arachis duranensis genomic clone AdH1172-CPY2-L20, genomic survey sequence.
FI317865.1:51-70
CTAGTGTGGCTGCCTTGGACTAAATATAGC51AATCGGCCAAGGTATGGTTTTGGTTTTACGCGTTTAATATATAAGGTTGT
AHT1B5RGH009-K18TV AHT1BS-Rearray Arachis hypogaea genomic clone AHT1B5RGH009-K18, genomic survey sequence.
FI500456.1:469-488
GACTCAAATTTGGATTTTGTGCATATTGGA469AATCGGCCAAGGTATGGTTTTGGTTTTCTCTATGTAATATATAATATTTT
Arachis duranensis BAC ADH167F07, 9 unordered pieces.
HF937571.1:94332-94351
TTCTGGTTTGAGATTTTGATTCATATTGAA94332AATCGGCCAAGGTATGGTTTCGGTTTCATCTATATAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:777052-777071
TACTCATTTTGAGCTTGGGTGCATAAAGGG777052AATCGGCCAAGGTATGGTTTCGGTTTCCTCTATGTAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:7820094-7820113
TGATTTGGAGGTGTTCCGAATTGAGCGGGG7820094AATCGGCCAAGGTATGGTTTCAGTTTCCTGTATCTAAATATAATGTGGTG
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:10134048-10134067
TTGAATAAATAGCTTTGGTCGTTATGTGGA10134048AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:15210268-15210287
GTGCTCACTTTTGAGTTTTGGCATATAGAA15210268AATCGGCCAAGGTATGGTTTCGGTTTCCTCCATGTAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:15429677-15429696
CTTAATTGTGTTGCCTTGGGTATACGAGGA15429677AATCGGCCAAGGTATGGTTTAGGTTTCTCGTACTTAATATATAATGTCTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:16567659-16567678
TTAAGTGGGTTGCCTTGGATAATACATGGA16567659AATCGGCCAAGGTATGGTTTAGGTTTCATGTATTTAATATATAGTGTTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:17399789-17399808
TGGTGGAAAGCTCATTTGGTTTATATTGGA17399789AATCGGCCAAGGTATGGTTTCGATTTCCTCTATGTAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:19977067-19977086
GGATTTTGAGGTCTTCTGAGTTTAGGGAGA19977067AATCGGCCAAGGTATGGTTTCGATTTCTCGTAGTTAATATATAATGTTAC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:20930525-20930544
AAACGCTTGAGGTGTTTTGGGTTATCACAA20930525AATCGGCCAAGGTATGGTTTTGGTTTCTCGTATATAATATATAATGTGTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:21615491-21615510
GTGAAATTAAAGTGTTCCGGGTTGAGCGGG21615491AATCGGCCAAGGTATGGTTTAGGTTTCACGCATTTAACATGTAAGGTTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:23078277-23078296
ATTAATTTGGTGATTTTGTGCTTGTGTGAG23078277AATCGGCCAAGGTATGGTTTCGGTTTCTTTTAAATAATATGTAATGTTGT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:24503685-24503704
TGCTAAATTGGAGATTTGGTGCATATAGGG24503685AATCGGCCAAGGTATGGTTTCGATTTCCTCTATGTAATATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:25114769-25114788
TTAAATAAATTGCTTTGGTTGTTACATGGA25114769AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:25597855-25597874
TTAATTAAATTGCCTTGATTGTTACGTGGG25597855AATCGGCCAAGGTATGGTTTAGGTTTCTTGTATTTAATATGTAACGTTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:25992330-25992349
GGCTTCGTTTTGGTGTTTGCTGTATTTGGG25992330AATCGGCCAAGGTATGGTTTCGGTTTCCTTTATATAATATGTAAGGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:32012236-32012255
GGTTTTTAGTAATGTTTGAGCTTGTGGAGA32012236AATCGGCCAAGGTATGGTTTCAATTTCTTGTGAAAAAGGCTAGTTATCTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:35474044-35474063
GGCTTCGCTTTGGTGTTTGGTGCATTTGGG35474044AATCGGCCAAGGTATGGTTTCAGTTTTCTTTATGTAATATGTAATGTTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:35481078-35481097
AGCTTCACTTTGGTGTTTGGTGCGTTTGGA35481078AATCGGCCAAGGTATGGTTTCAATTTCTTTTATGTAATATGTAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:37228815-37228834
TTGAATAAATAGCTTTGGTCATTACGTGGA37228815AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATATAATGTTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:38732358-38732377
GGTTTTGTTTTGGTATTTGGAGCATTTGAG38732358AATCGGCCAAGGTATGGTTTCGGTTTCCTCTATATAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:42747003-42747022
GAATTGTGAGGTGTTTCATGGATTACGAGG42747003AATCGGCCAAGGTATGGTTTCGGTCTCTTGTAACTAAAATATAATATGTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:43346633-43346652
TTGAATTTTAGTGGTTTGAGTTTAGAGAGG43346633AATCGGCCAAGGTATGGTTTCAGTTTCTCGTATCTAAAATATAATGTAAT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:44277923-44277942
ACACAAATTTAGTGTATAGCACATATTGGG44277923AATCGGCCAAGGTATGGTTTCAGTTTTCTCTATATAATATATAATATTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:44878591-44878610
GTGCTCATTTTGGGTTAAGGGCATATTGGA44878591AATCGGCCAAGGTATGGTTTTGGTTTCCTCTATGTAGTATATAACATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:48243053-48243072
AGGTCATTTTGATGTTTTGGATTGTGCAGG48243053AATCGGCCAAGGTATGGTTTCGGTTTTCTTTAGTTAATATGTAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:50023843-50023862
GAATCAAGTTTGGTGTTTGAGCATATTAGG50023843AATCGGCCAAGGTATGGTTTTAGTATTTTTTGTGTAATATGTAATGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:51920884-51920903
TATAAGAGAGGTGTTCCGGGGTTATCAGAA51920884AATCGGCCAAGGTATGGTTTTGGTTTCTCGTAATTAAATAAAATACGTCG
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:52359694-52359713
TGAAATTTGAAGTGTTCCAGGTGGAACGGG52359694AATCGGCCAAGGTATGGTTTCGATTTCCTGTATCTAAAATGTAATGTGGT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:53881391-53881410
TGCTAAGTTGGAAATTGGGTGCATAAACGG53881391AATCGGCCAAGGTATGGTTTCGATTTTCTCTATGTAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:53997914-53997933
GACTCATAGTGGTAGCTTGAGCATATTAGG53997914AATCGGCCAAGGTATGGTTTCGATTTTCTTTATGTAATATATAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:55968332-55968351
TGCTCTTTTGGGGTTGTGGTTCATATTGGG55968332AATCGGCCAAGGTATGGTTTTGGTTTTTTCTATGTAATATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:56874911-56874930
CTTTTGGTGGTGTCTCAGGTTATACAGAGA56874911AATCGGCCAAGGTATGGTTTTGGTTTCTCGTATTTAATATATAATGTCTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:61940166-61940185
TTAAATAAATTGATTTGGTTGTTACGTGGA61940166AATCGGCCAAGGTATGGTTTAGGTTTCTTGCATTTAATATGTAAGGTTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:63864476-63864495
GTCAAATTTTGGTGTATTGTGCATATTGAG63864476AATCGGCCAAGGTATGGTTTCAGTTTTCTCTATGTGATATATAATGCTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:64415065-64415084
GACTCAAAGTGGTGGTTTCTACATATTGGG64415065AATCGGCCAAGGTATGGTTTCAGTTTTCTCAATGTAATATATAATATTTT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:65431068-65431087
CACTCAATTTGAGTTTTGGTACATATTAAG65431068AATCGGCCAAGGTATGGTTTCGGTTTTCTCTATGTAATATATATTATTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:73827003-73827022
TTGATTTGAGGGTGTTTCGGGTGAAACGAG73827003AATCGGCCAAGGTATGGTTTCGATTTCCTGTATCTAAAATGTAATGTGGT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:75651618-75651637
GAATCAAGTTTGGTGTTTGAACATATTGAG75651618AATCGGCCAAGGTATGGTTTTTATTTTCTTTATGTAATATGTAATGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:79502706-79502725
GGCTCAAATTGGTGTTTTGTGCAAATTGGA79502706AATCGGCCAAGGTATGGTTTCAGTTTTCTCTATGTAATATGTAATATCTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:80704079-80704098
TGCTCATTTGTGGCTTAAAGGCATATTAGA80704079AATCGGCCAAGGTATGGTTTCAATTTTCTCTATGTAGTATATAGTATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:81873062-81873081
TGTAGTGAAGTGGTTTTGAGCGTGGAGGAT81873062AATCGGCCAAGGTATGGTTTCGGTTTCTTTTATGTAATATGTAATATTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:83173448-83173467
TATAAGTGAGTTGTTCCATGCGTCAGGAAG83173448AATCGGCCAAGGTATGGTTTCGGTTTCTCGTAACTAAAATATAATGTGTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:85189242-85189261
TCAAGATTTAGTAAATTTGTACATATTGGA85189242AATCGGCCAAGGTATGGTTTCAGTTTTCTCTATGTAATATATAACGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:86067027-86067046
GAATCAATTTTGGTGTTTGAGCATATTGGA86067027AATCGGCCAAGGTATGGTTTTGGTTTCTTTTATGTAATATGTAATGTTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:89580629-89580648
TCATTTGTGGCGTTCCAAGCTTAGGGGAGA89580629AATCGGCCAAGGTATGGTTTGGGTTTCTCGTGTTTAATATATAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:89594999-89595018
TCATTTGTAGCGTTCCAAGCTTAGGGGAGA89594999AATCGGCCAAGGTATGGTTTCGGTTTCTCATATTTAATATATAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:91347818-91347837
TGGTTGAAAGCTCCTTTGGTTCATATTAGG91347818AATCGGCCAAGGTATGGTTTTGGTTTTCTCTATGTAGTATATAATATTCA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:100464351-100464370
GAAAGCTTATTTTCTTTTGAGCATATTAGG100464351AATCGGCCAAGGTATGGTTTCGATTTCCTTTAGGTAATATGTAATGTTTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:102198800-102198819
CTTGTGGAGTTGTCTTGAGTTATACATGGA102198800AATCGGCCAAGGTATGGTTTTAGTGTCTCGTATATAATATGTACGGTGTC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:103855484-103855503
TGAATTATGGTGGTTTTGAGCTTAGGGAGG103855484AATCGGCCAAGGTATGGTTTTGATTTCTCGTAAATAATATAAATGTCTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATCGGCCAAGGTATGGTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATCGGCCAAGGTATGGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.763 | 0.754 | search_plus_done; http://172.18.8.135:50400/match?q=AATCGGCCAAGGTATGGTTT&k=0&no_gap=0&offset=0&limit=50
0.825 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCATACCTTGGCCGATT&k=0&no_gap=0&offset=0&limit=0
0.825 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).