GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:49:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense cDNA clone:RCE01717.
BB903863.1:388-407
CAAGAACAACTGGGAAGGTCTATTAGATCC388AATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTC
Trifolium pratense cDNA clone:RCE01729.
BB903874.1:414-433
CAAGAACAACTGGGAAGGTCTATTAGATCC414AATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTC
Trifolium pratense DNA, clone:RCG03039.
DE214536.1:162-181
CAAGAACAACTGGGAAGGTCTATTAGATCC162AATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTC
Trifolium pratense DNA, clone:RCG03774.
DE215144.1:162-181
CAAGAACAACTGGGAAGGTCTATTAGATCC162AATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTC
Trifolium pratense DNA, clone:RCG19709.
DE227124.1:116-135
CAAGAACAACTGGGAAGGTCTATTAGATCC116AATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTC
Trifolium pratense DNA, clone:RCG01689.
DE213460.1:36-55
GAGCGAGTTCACCATATCGAATGATTTCTT36TGCGTAGGTTGGAGTCCATTGGATCTAATAGACCTTCCCAGTTGTTCTTG
Trifolium pratense DNA, clone:RCG02552.
DE214144.1:36-55
GAGCGAGTTCACCATATCGAATGATTTCTT36TGCGTAGGTTGGAGTCCATTGGATCTAATAGACCTTCCCAGTTGTTCTTG
Trifolium pratense DNA, clone:RCG03362.
DE214800.1:36-55
GAGCGAGTTCACCATATCGAATGATTTCTT36TGCGTAGGTTGGAGTCCATTGGATCTAATAGACCTTCCCAGTTGTTCTTG
Trifolium pratense DNA, clone:RCG04455.
DE215705.1:36-55
GAGCGAGTTCACCATATCGAATGATTTCTT36TGCGTAGGTTGGAGTCCATTGGATCTAATAGACCTTCCCAGTTGTTCTTG
Trifolium pratense DNA, clone:RCG01076.
DE246720.1:36-55
GAGCGAGTTCACCATATCGAATGATTTCTT36TGCGTAGGTTGGAGTCCATTGGATCTAATAGACCTTCCCAGTTGTTCTTG
Pusillimonas sp. T7-7, complete genome.
CP002663.1:3815331-3815350
CTGCGCCCACAATGCCCACCATGGTGGAGT3815331TGCGTAGGTTGGAGTCCATTTGATAGGTGGAAAAGCCAACAAAGCGGGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATGGACTCCAACCTACGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGGACTCCAACCTACGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.162 | 0.153 | search_plus_done; http://172.18.8.135:50400/match?q=AATGGACTCCAACCTACGCA&k=0&no_gap=0&offset=0&limit=50
0.308 | 0.146 | search_minus_done; http://172.18.8.135:50400/match?q=TGCGTAGGTTGGAGTCCATT&k=0&no_gap=0&offset=0&limit=45
0.312 | 0.004 | cgi_end;

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