GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:38:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdfw2010n01.y1 Mdfw Malus domestica cDNA clone Mdfw2010n01 5', mRNA sequence.
CN491360.1:406-425
ATTGGTGTTCTTTCCTGTAAATATGTCTGT406CGTTCCAGCAATTTGTTTGT
Sicus ferrugineus genome assembly, chromosome: X.
OV277351.1:20171347-20171366
TTGGTGCCTGTTGAAGTAACTTTGTGGCGT20171347CGTTCCAGCAATTTGTTTGTGTAACTTATTTCAATCGTTCATTCTTACAT
Cheilosia pagana genome assembly, chromosome: 1.
OW386166.1:201792-201811
TACAAAACACTGAGCATACAAAAACCGTGA201792CGTTCCAGCAATTTGTTTGTAAATGTAATGTTCATGTTTTTATACGCCTT
Aphrophora alni genome assembly, chromosome: 2.
OY740767.1:6091159-6091178
ACTTGAAACCTATCTAAAAACTGAAGGACT6091159CGTTCCAGCAATTTGTTTGTTTAATGAACTTGTCTGAGGTGTCGGAAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACAAACAAATTGCTGGAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAAACAAATTGCTGGAACG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.105 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=ACAAACAAATTGCTGGAACG&k=0&no_gap=0&offset=0&limit=50
0.192 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTCCAGCAATTTGTTTGT&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.003 | cgi_end;

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