GGGenome | Results

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2025-04-17 07:19:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Parietaria judaica genome assembly, chromosome: 8.
OX940867.1:12976662-12976681

TGAGGAGAACGGTGACCATCCAGTCAGCGA12976662ACATGACGTTGAAAGCGACACCGATGCTGATGCCGAGCATGAGCATCGGC

Brassica napus unknown mRNA.
DQ062725.1:129-148

GCCCATGCTTATGCTTGGGATTAGCGTTGG129TGTCGCTTTCAACGTCATGTTTCCAGATTGGATGGTCACAGTACTCCTCA

Parietaria judaica genome assembly, chromosome: 12.
OX940871.1:17783247-17783266

GCCGATGCTCATGCTCGGCATCAGCATCGG17783247TGTCGCTTTCAACGTCATGTTCGCAGACTGGATGGTCACCGTTCTCCTCA

Epinotia demarniana genome assembly, chromosome: 16.
OX244275.1:2521170-2521189

CCACACAACGGGGTTAACTACTTTGTACCG2521170TGTCGCTTTCAACGTCATGTTAAATTGCCATATAAAGTTTTCAAACAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGACGTTGAAAGCGACA&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TGTCGCTTTCAACGTCATGT&k=0&no_gap=0&offset=0&limit=49
0.133 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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