GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 08:25:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES05B06, 5' end sequence.
FY384012.1:271-290
TTCGATCCAAACTTCGTAAATCTCTCAAAG271ACATGCCTTCTTCTCAGCGTTCTTTTGAAGATGATGTGATTCAGCGAACG
Dianthus caryophyllus mRNA, clone: CES15H03, 5' end sequence.
FY387941.1:285-304
TTCGATCCAAACTTCGTAAATCTCTCAAAG285ACATGCCTTCTTCTCAGCGTTCTTTTGAAGATGATGTGATTCAGCGAACG
Dianthus caryophyllus mRNA, clone: CES24G23, 5' end sequence.
FY391323.1:209-228
TTCGATCCAAACTTCGTAAATCTCTCAAAG209ACATGCCTTCTTCTCAGCGTTCTTTTGAAGATGATGTGATTCAGCGAACG
Felis catus Senzu DNA, chromosome: C1, American Shorthair breed.
AP023159.1:164208757-164208776
GTGTTCTTATAAAGGACAGAAAAGGAGAGG164208757ACGCTGAGAAGAAGGCATGTGAAGACGGAAGCACAGGGTGGGGTTATGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACATGCCTTCTTCTCAGCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATGCCTTCTTCTCAGCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.376 | 0.367 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGCCTTCTTCTCAGCGT&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=ACGCTGAGAAGAAGGCATGT&k=0&no_gap=0&offset=0&limit=47
0.405 | 0.001 | cgi_end;

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