GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 13:52:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES02N20, 5' end sequence.
FY383172.1:317-336
GAGACGGAAGAAGTGATCAATAAGGTCCGA317ACCACAATTAGCTTGGACCGAAACGACCCTAATGTAGCGGATGCCGTAGC
Dianthus caryophyllus mRNA, clone: CES11_E09, 5' end sequence.
FY386363.1:284-303
GAGACGGAAGAAGTGATCAATAAGGTCCGA284ACCACAATTAGCTTGGACCGAAACGACCCTAATGTAGCGGATGCCGTAGC
Dianthus caryophyllus mRNA, clone: CES22J10, 5' end sequence.
FY390625.1:307-326
GAGACGGAAGAAGTGATCAATAAGGTCCGA307ACCACAATTAGCTTGGACCGAAACGACCCTAATGTAGCGGATGCCGTAGC
TSA: Dianthus caryophyllus mRNA, contig: CAK09.109.C1.
FX296707.1:316-335
GAGACGGAAGAAGTGATCAATAAGGTCCGA316ACCACAATTAGCTTGGACCGAAACGACCCTAATGTAGCGGATGCCGTAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCACAATTAGCTTGGACCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCACAATTAGCTTGGACCG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.303 | 0.294 | search_plus_done; http://172.18.8.135:50400/match?q=ACCACAATTAGCTTGGACCG&k=0&no_gap=0&offset=0&limit=50
0.320 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTCCAAGCTAATTGTGGT&k=0&no_gap=0&offset=0&limit=46
0.320 | 0.000 | cgi_end;

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