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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 13:39:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ovis canadensis canadensis isolate 43U chromosome 1 sequence.
CP011886.1:12285325-12285344
CTCCTGAGTCTTAGGGAAGGGCAAGGTGTG12285325ACCATGTACCCTCACCCATGACCCAGCVTGAAGCAGCCCCAACATCAGGA
Pelobates cultripes genome assembly, chromosome: 05.
OW240916.1:26897045-26897064
AATAAGTGGGTAAAGGGTGCAGCATAGTCT26897045ACCATGTACCCTCACCCATGGAGAGTGAAGTGGGGCTCAATTAAAAAGAA
TSA: Capsicum annuum EJ_MegaContig_5586, mRNA sequence.
JW129572.1:1518-1537
ATTCACTTTTACCCATTTTTATTTTATCCT1518ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATACAAAAAATA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:11975933-11975952
TGTCGTTTTTACCTATTCTTATTTTATCCT11975933ACCATGTACCCTCACCCATGTTATTATACCCTCATAAAATACAAAAAAAT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:322212469-322212488
TATCATTTTTACCCATTTTTACTTTATCCT322212469ACCATGTACCCTCACCCATGTAATTATACCCCGCAAAATGACAAAAATAA
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:150681459-150681478
GTCGTTTTTACCCATTTTTTATTTTATCCT150681459ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATACAAAAAAAA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:241210832-241210851
GTCGTTTTTACCCATTTTTATTTTTATCCT241210832ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATATAAAAAAAA
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:18635065-18635084
TCGGTTTTACCCATTTTTTTACTTTATCCT18635065ACCATGTACCCTCACCCATGTAATTATACCCCACAAAAATACAAAATAAC
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:251193786-251193805
TGTCGTTTTTACCCATTTTATTTTTATCCT251193786ACCATGTACCCTCACCCATGTTATTATATCCCCCACAAAATACAAGAAAA
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:7305315-7305334
ATCTTTTTTACCCATTTTTTACTTTAGCCT7305315ACCATGTACCCTCACCCATGTAATTATACCCTACAAAAATACAAAAAATA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:7672690-7672709
ATATCATTTTACCTATTTTTACCTTATCCT7672690ACCATGTACCCTCACCCATGTAATTATATCCCACAAAAATACAAAAAAAT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:112475711-112475730
ATCGTTTTTACCCATTTTTTACTTTATCCT112475711ACCATGTACCCTCACCCATGTAATTATACCCTGCAAAAATATACAAAAAT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:224216739-224216758
ATCATTTTTACCCATTTTTTACTTTATCCT224216739ACCATGTACCCTCACCCATGTAATTATACCCCACAAAACTAACAAAAATT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:224225472-224225491
ATCATTTTTACCCATTTCTTACTTTATCCT224225472ACCATGTACCCTCACCCATGTAATTATAACCCACAAAAATACAAAAATAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:224714689-224714708
ATCATTTTTACCCATCTTTTACTTTATCCT224714689ACCATGTACCCTCACCCATGTAATTATACCCAAAAAATACAAAAATAACA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:224723753-224723772
ATCATTTTTACCCATTTTTTACTTTATCCT224723753ACCATGTACCCTCACCCATGTAATTATACCCCAAAAAAATACAAAAATAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:251990741-251990760
ATTCACTTTTACCCGTTTTTATTTTATCCT251990741ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATACAAAAAAAT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:19830315-19830334
ATATCGTTTTACCCATTTTTACTTTATCCT19830315ACCATGTACCCTCACCCATGTAATTACATCCTATAAAAATACAAAAAATA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:148913935-148913954
ATCGTTTTTACCTATTTTTTACCTTATCCT148913935ACCATGTACCCTCACCCATGTGATAATCCCTCCATAAAATGACAAAAATA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:171897568-171897587
TATCATTTTTACCCATTTTTACTTTATCCT171897568ACCATGTACCCTCACCCATGTAATTATACCCCGCAAAATGACAAAAATAA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:173992322-173992341
ATTGTTTTTACCCATTTTTTACTTTATCCT173992322ACCATGTACCCTCACCCATGTAATTACACCTCCACAAATGACAAAAATAA
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:264460620-264460639
TGTCGTTTTTACCCATTTAATTTTTATCCT264460620ACCATGTACCCTCACCCATGTTATTATACCCCCACAAAATAGAAGAAAAA
Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:29418294-29418313
ATATCATTTTACCCATTTTTACCTTATCCT29418294ACCATGTACCCTCACCCATGTAATTACATCCCACAAAAATACAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:250027197-250027216
TACCATTTTTACTCATTTTTACTTTATCCT250027197ACCATGTACCCTCACCCATGTAATTATACCCCACAAAATAAAAAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:255862118-255862137
TGTCGTTTTTACCCATTTTATTTTTATCCA255862118ACCATGTACCCTCACCCATGCTATTATACCCTCACAAAATACAAAAAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:256449911-256449930
ATGTTGTTTTACCCATTTTTACCTTATCCG256449911ACCATGTACCCTCACCCATGTGATGATCCCTCCACAAATAACAAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:6301832-6301851
AAAGCATTTTTTCATTTTTTACCTTATCCT6301832ACCATGTACCCTCACCCATGTGATTATATCCCATAAAAATACAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:233891524-233891543
TATCATTTTTACCCATTTTTACTTTATCCT233891524ACCATGTACCCTCACCCATGTAATTATATCCCGTAAAAATACAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:192202930-192202949
ATGTCATTTTTACCCATCTTATTTTATCCT192202930ACCATGTACCCTCACCCATGTCATTAGACCCCGCAAAATACAAAAAAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:274724050-274724069
TATCATTTTTATCCATTTTTACCTTATCCT274724050ACCATGTACCCTCACCCATGCAATTATACCCCACAAAAAATACAAAAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:274812688-274812707
TATCATTTTTATCCATTTTTACCTTATCCT274812688ACCATGTACCCTCACCCATGCAATTATACCCCACAAAAAATACAAAAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:274899761-274899780
TATCATTTTTATCCATTTTTACCTTATCCT274899761ACCATGTACCCTCACCCATGCAATTATACCCCACAAAAAATACAAAAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:274974214-274974233
ATGTCGTTTTACCCATTTTTACCTTATCCT274974214ACCATGTACCCTCACCCATGTGATAATCCCTCCACAAAATGACAAAACAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:161783327-161783346
ATCGTTTTTACCTATTTTTTACCTTATCCT161783327ACCATGTACCCTCACCCATGTGATAATCCCTCCATAAAATGACAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:183723873-183723892
TATCATTTTTACCCATTTTTACTTTATCCT183723873ACCATGTACCCTCACCCATGTAATTATACCCCGCAAAATGACAAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:185785562-185785581
ATTGTTTTTACCCATTTTTTACTTTATCCT185785562ACCATGTACCCTCACCCATGTAATTACACCTCCACAAATGACAAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:18997476-18997495
ATATCGTTTTACCCATTTTTACTTTATCCT18997476ACCATGTACCCTCACCCATGTAATTACATCCTATAAAAATACAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:8108754-8108773
ATCTTTTTTACCCATTTTTTACTTTAGCCT8108754ACCATGTACCCTCACCCATGTAATTATACCCTACAAAAATACAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:15129972-15129991
ATATCGTTTTACCCATTCTTACCTTATCCT15129972ACCATGTACCCTCACCCATGTAATTACATCCCACAAAAATACAAAAAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:14141122-14141141
ATTGTTTTTACCTAATTTTTACTTTATCCT14141122ACCATGTACCCTCACCCATGTAATTATACCCCACAAAAATACAAAATAAC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:61708732-61708751
GTCGTTTTTACCCATTTTTATTTTTATCCT61708732ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATACAAAAAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:282091010-282091029
AATTAGTTTTCTCATTTTTTACTTTATCCT282091010ACCATGTACCCTCACCCATGTAATTATACCTACAAAAATACAAAATAACA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:151611453-151611472
GTCGTTTTTACCCATTTTTTATTTTATCCT151611453ACCATGTACCCTCACCCATGTTATTATACCCTCACAAAATACAAAAAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:156790538-156790557
TGTCATTTTTACCCTTTCTTATTTTATCCT156790538ACCATGTACCCTCACCCATGTCATTATACCCCGCAAAATACAAAAAAATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:58662184-58662203
AGCATTTTTTTTCATTTTTTACCTTATCCT58662184ACCATGTACCCTCACCCATGTGATTAGACCTCACAAAAATACAAAAATAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:191524510-191524529
ATATCGTTTTACCCATTTTTACCTTATTCT191524510ACCATGTACCCTCACCCATGTAATTACATCCCCACAAAACTACAAAAAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:323172151-323172170
TATCATTTTTACCCATTTTTACTTTATCCT323172151ACCATGTACCCTCACCCATGTAATTATACCCCGCAAAATGACAAAAATAA
Capsicum annuum clone BAC CaCM511O09_Contig, complete sequence.
GU048887.1:120422-120441
TGTCATTTTTACCCTTTCTTATTTTATCCT120422ACCATGTACCCTCACCCATGTCATTATACCCCGTAAAATACAACAAAATA
Cervus elaphus genome assembly, chromosome: 20.
OU343097.1:128244822-128244841
TCCTGATGTTGGGGCTGCTTCATGCTGGGT128244822CATGGGTGAGGGTACATGGTCACCCCTTGCCCTTTCCTAAGACTCAGGAG
Muntiacus reevesi genome assembly, chromosome: 1.
OZ005624.1:166726702-166726721
TCCTGATGTTGGGGCTGCTTCAGGCTGGGT166726702CATGGGTGAGGGTACATGGTCACCCCTTGCCCTTTCCTAAGACTCAGGAG
BJ03002B11 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO910134.1:149-168
TTGTTTTGTTATTTTGTGGAGGGATTATAA149CATGGGTGAGGGTACATGGTAGGATAAAGTAAAAAATAGGTAAAAATAAT
TSA: Capsicum annuum MGMT_Contig36188 mRNA sequence.
JW086432.1:108-127
TATTTTTTGTATTTTGTGAGGGTATAATAA108CATGGGTGAGGGTACATGGTAGGATAAAATAAAAATGGGTAAAAGTGAAT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:91332312-91332331
ATTTTTTTGTATTTTGTGAGGGTATAATAA91332312CATGGGTGAGGGTACATGGTAGGATAAAATAAGAATGGGTAAAAACGACA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:91348011-91348030
TATTTTTTGTATTTTGTGAGGGTATAATAA91348011CATGGGTGAGGGTACATGGTAGGATAAAATAAGAATGGGTAAAAACGACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCATGTACCCTCACCCATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATGTACCCTCACCCATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.125 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATGTACCCTCACCCATG&k=0&no_gap=0&offset=0&limit=50
0.233 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=CATGGGTGAGGGTACATGGT&k=0&no_gap=0&offset=0&limit=2
0.238 | 0.004 | cgi_end;

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