GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 20:39:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sphaeramia orbicularis genome assembly, chromosome: 17.
LR597474.1:16815884-16815902
ATGTGGCCCCTGAACTAAAATATGTCTGAC16815884ACCCCTGATGTAGCGGAATAAAAACTACAATATTTGCCTCTGAGATGTT
Danio kyathit genome assembly, chromosome: 5.
LR812523.1:7976340-7976358
AACACTGGCTCTCCAGGGCTTAGGTTGGAC7976340ACCCCTGATGTAGCGGAATGACAATAAAGCTCGACTTGACTTAAAAAAA
Podarcis lilfordi genome assembly, chromosome: 7.
OX395132.1:86050624-86050642
GCTTGGAGACCTAGGCTGGCAAAGGCTCCC86050624ACCCCTGATGTAGCGGAATGGCTGCCAGTCAGACCACGGGGAAAAGCAA
Microcos paniculata chromosome 2b.
CP131448.1:32678829-32678847
CCTCTCTCCTCCCTCCCTCCCTCTCCCACC32678829ACCCCTGATGTAGCGGAATGGGTTAAGACAATAGGGCTCAACAATTAGG
Microcos paniculata chromosome 2a.
CP131457.1:31732576-31732594
CCTCTCTCCTCCCTCCCTCCCTCTCCCACC31732576ACCCCTGATGTAGCGGAATGGGTTAAGACAATAGGGCTCAACAATTAGG
Podarcis cretensis genome assembly, chromosome: 7.
OX638155.1:4155932-4155950
TTGCTTTTCCCCGTGGACTGACTGGCAGCC4155932ATTCCGCTACATCAGGGGTGGGGAGCCTTTGCCAGCCTAGGTCTCCACG
Limanda limanda genome assembly, chromosome: 12.
OY755003.1:2911649-2911667
GCCCAACAGATGCCTTATAAAACACAATTA2911649ATTCCGCTACATCAGGGGTTTTTTTTTTTAATCTCCTTAAAATACCAGA
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:5099437-5099455
GGGAATTTCGTTCGATTTCCCTTGACATAT5099437ATTCCGCTACATCAGGGGTGATTACTATATATATATATATACATGTCAA
Maratus speciosus genome assembly, chromosome: 7.
OZ010793.1:145368436-145368454
AATAAATTTCATTCGACAATGTGCTTGAGC145368436ATTCCGCTACATCAGGGGTGTCAAACTCTGGGCCGCCAAATACCACTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCCCTGATGTAGCGGAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCCCTGATGTAGCGGAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCCTGATGTAGCGGAAT&k=0&no_gap=0&offset=0&limit=50
0.153 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCCGCTACATCAGGGGT&k=0&no_gap=0&offset=0&limit=45
0.156 | 0.003 | cgi_end;

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