GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:04:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

metagenome genome assembly, chromosome: 1.
OW818642.1:3482658-3482675
TGTACAAGGTTGAAGGCGAAATCAACACCG3482658ACGATTTTTCACCTGCAGGCGATGCCTGGAGCCGTCCTGATATCCCAC
294575874 Nasonia vitripennis Adult Female Nasonia vitripennis cDNA clone 102K13 5', mRNA sequence.
GE445570.1:139-156
ACCAGTCATATCACTCGTCTAGGCAGAAGG139ACGATTTTTCACCTGCAGGAGCACATAGTCTAGCAGCACACCGAGCAG
Pseudopediastrum boryanum genome assembly, chromosome: 1.
OY744493.1:12350753-12350770
CAAGCGGGTCGAGAATTTCCTCGCAGACGC12350753ACGATTTTTCACCTGCAGTTTTACCCATGAGGGAAGGTACACACAGTA
Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence.
BA000031.2:1436745-1436762
AACCGCCAGCCAAGGTGAATTTAAAGGACG1436745ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_006 chromosome 1, complete sequence.
CP009765.1:1423477-1423494
AACTGCCAGCCAAGGTGAATTTAAAGGACG1423477ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_004 chromosome 1, complete sequence.
CP009847.1:1433192-1433209
AACCGCCAGCCAAGGTGAATTTAAAGGACG1433192ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain CHN25 chromosome 1, complete sequence.
CP010883.1:1564784-1564801
AACTGTCAGCCAAGGTGAATTTAAAGGACG1564784ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_014 chromosome 1, complete sequence.
CP011406.1:1635741-1635758
AACTGCCAGCCAAGGTGAATTTAAAGGACG1635741ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_022 chromosome 1, complete sequence.
CP013248.1:1439035-1439052
AACCGCCAGCCAAGGTGAATTTAAAGGACG1439035ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 1682 isolate V12/023 chromosome 1, partial sequence.
CP019059.1:1333227-1333244
AACTGCCAGCCAAGGTGAATTTAAAGGACG1333227ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Komagataeibacter europaeus strain SRCM101446 chromosome, complete genome.
CP021467.1:187621-187638
CCGATTTTCTGCATACCGTTCGTACTGTTT187621ACGATTTTTCACCTGCAGACCGGGCTTAATATCTTTCCGACCTCTATT
Vibrio parahaemolyticus strain PB1937 chromosome I, complete sequence.
CP022243.1:1489153-1489170
AACCGCCAGCCAAGGTGAATTTAAAGGACG1489153ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain MAVP-R chromosome 1, complete sequence.
CP022552.2:1875626-1875643
AACTGCCAGCCAAGGTGAATTTAAAGGACG1875626ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_072 chromosome 1, complete sequence.
CP023472.1:1437510-1437527
AACTGCCAGCCAAGGTGAATTTAAAGGACG1437510ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain FORC_071 chromosome 1, complete sequence.
CP023485.1:1423205-1423222
AACTGCCAGCCAAGGTGAATTTAAAGGACG1423205ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain S107-1 chromosome 1, complete sequence.
CP028481.1:1411174-1411191
AACCGCCAGCCAAGGTGAATTTAAAGGACG1411174ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 20160303005-1 chromosome I, complete sequence.
CP034298.1:1478528-1478545
AACCGCCAGCCAAGGTGAATTTAAAGGACG1478528ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain D3112 chromosome 1, complete sequence.
CP034565.1:1388474-1388491
AACCGCCAGCCAAGGTGAATTTAAAGGACG1388474ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2012AW-0154 chromosome 1, complete sequence.
CP035701.1:1439349-1439366
AACCGCCAGCCAAGGTGAATTTAAAGGACG1439349ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain LVP1 chromosome 1, complete sequence.
CP040100.1:1352350-1352367
AACTGCCAGCCAAGGTGAATTTAAAGGACG1352350ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2012AW-0353 chromosome 1, complete sequence.
CP046763.1:2716963-2716980
AACCGCCAGCCAAGGTGAATTTAAAGGACG2716963ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2014V-1066 chromosome 1, complete sequence.
CP046779.1:1970334-1970351
AACCGCCAGCCAAGGTGAATTTAAAGGACG1970334ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2013V-1244 chromosome 1, complete sequence.
CP046782.1:1527397-1527414
AACTGCCAGCCAAGGTGAATTTAAAGGACG1527397ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2013V-1181 chromosome 1, complete sequence.
CP046783.1:872777-872794
AACTGCCAGCCAAGGTGAATTTAAAGGACG872777ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 2012AW-0224 chromosome 1, complete sequence.
CP046831.1:1203967-1203984
AACCGCCAGCCAAGGTGAATTTAAAGGACG1203967ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain HZ-52 chromosome I, complete sequence.
CP047985.1:1072855-1072872
AACCGCCAGCCAAGGTGAATTTAAAGGACG1072855ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 20140723005 chromosome I, complete sequence.
CP047990.1:1417420-1417437
AACCGCCAGCCAAGGTGAATTTAAAGGACG1417420ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 20150710009 chromosome I, complete sequence.
CP047995.1:1418985-1419002
AACCGCCAGCCAAGGTGAATTTAAAGGACG1418985ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain TJA114 chromosome 2.
CP060088.1:1493486-1493503
AACCGCCAGCCAAGGTGAATTTAAAGGACG1493486ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain SHP/2 chromosome 1.
CP066156.1:1363044-1363061
AACTGCCAGCCAAGGTGAATTTAAAGGACG1363044ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTACACTGAAAA
Vibrio parahaemolyticus strain NUK/7 chromosome 1.
CP066160.1:1412180-1412197
AACTGCCAGCCAAGGTGAATTTAAAGGACG1412180ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 81TDH2 chromosome 1.
CP066244.1:1392233-1392250
AACTGCCAGCCAAGGTGAATTTAAAGGACG1392233ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain DHO76 chromosome I, complete sequence.
CP066246.1:1397503-1397520
AACTGCCAGCCAAGGTGAATTTAAAGGACG1397503ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain LH24 chromosome I, complete sequence.
CP068622.1:1417420-1417437
AACCGCCAGCCAAGGTGAATTTAAAGGACG1417420ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain VP17 chromosome I, complete sequence.
CP068633.1:1489153-1489170
AACCGCCAGCCAAGGTGAATTTAAAGGACG1489153ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain TJ-187 chromosome I, complete sequence.
CP068647.1:1417420-1417437
AACCGCCAGCCAAGGTGAATTTAAAGGACG1417420ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain LH214 chromosome LH214_1, complete sequence.
CP085857.1:1434191-1434208
AACCGCCAGCCAAGGTGAATTTAAAGGACG1434191ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain JX-FB-vp35 chromosome 1.
CP093274.1:1436744-1436761
AACCGCCAGCCAAGGTGAATTTAAAGGACG1436744ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain BM8A chromosome 1, complete sequence.
CP099926.1:1408813-1408830
AACTGCCAGCCAAGGTGAATTTAAAGGACG1408813ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain BM12B chromosome 1, complete sequence.
CP099932.1:1421433-1421450
AACTGCCAGCCAAGGTGAATTTAAAGGACG1421433ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain BM23A chromosome 1, complete sequence.
CP099941.1:1421810-1421827
AACTGCCAGCCAAGGTGAATTTAAAGGACG1421810ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain VP20210406 chromosome 1.
CP107279.1:1436776-1436793
AACCGCCAGCCAAGGTGAATTTAAAGGACG1436776ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain vp-HL-202005 chromosome 1, complete sequence.
CP114194.1:1416318-1416335
AACCGCCAGCCAAGGTGAATTTAAAGGACG1416318ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain LC chromosome 1, complete sequence.
CP119301.1:1405058-1405075
AACCGCCAGCCAAGGTGAATTTAAAGGACG1405058ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain 23EBVib0155 chromosome 1, complete sequence.
CP128370.1:1438520-1438537
AACTGCCAGCCAAGGTGAATTTAAAGGACG1438520ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus isolate BM19BA chromosome I, complete sequence.
CP129926.1:1574218-1574235
AACTGCCAGCCAAGGTGAATTTAAAGGACG1574218ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus isolate BM18B chromosome I, complete sequence.
CP129932.1:1634731-1634748
AACCGCCAGCCAAGGTGAATTTAAAGGACG1634731ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain I13A chromosome I, complete sequence.
CP129936.1:1571993-1572010
AACCGCCAGCCAAGGTGAATTTAAAGGACG1571993ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain BM21A chromosome I, complete sequence.
CP129938.1:1582516-1582533
AACCGCCAGCCAAGGTGAATTTAAAGGACG1582516ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain HZ chromosome 1, complete sequence.
CP130651.1:1449079-1449096
AACCGCCAGCCAAGGTGAATTTAAAGGACG1449079ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain RP0132 chromosome 2, complete sequence.
CP131931.1:1225667-1225684
AACTGCCAGCCAAGGTGAATTTAAAGGACG1225667ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain TW01 chromosome 1, complete sequence.
CP133900.1:1516580-1516597
AACCGCCAGCCAAGGTGAATTTAAAGGACG1516580ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Vibrio parahaemolyticus strain X1 chromosome I, complete sequence.
CP136903.1:1476249-1476266
AACTGCCAGCCAAGGTGAATTTAAAGGACG1476249ACGATTTTTCACCTGCAGTCGTCAACCTAATTGTACTTATACTGAAAA
Seladonia tumulorum genome assembly, chromosome: 5.
OU565270.1:17922084-17922101
AGGAGATACCTTCGTTGTCCTGCTGCAGTT17922084ACGATTTTTCACCTGCAGAAACTGATAAGAGCTAAGTATGGGTTAACT
Lasioglossum morio genome assembly, chromosome: 7.
OU744329.1:18474138-18474155
AGGAGATACCTTCGTTGTCCTGCTGCGGTT18474138ACGATTTTTCACCTGCAGAAACTGATAAGAGCTAAGTATGGGTTAACT
Steromphala cineraria genome assembly, chromosome: 14.
OU744733.1:1237670-1237687
TGTGATATGTAAACCTTGCATGGTATTATC1237670ACGATTTTTCACCTGCAGAAATATGAGAACATGTGAAAACATGTAACT
Lasioglossum pauxillum genome assembly, chromosome: 1.
OW121699.1:22759196-22759213
AGGAGATACCTTCGTTGTCCTGCTGCAGTT22759196ACGATTTTTCACCTGCAGAAATTGATAAGAGCTAAGTATGGGTTAACT
Sabethes cyaneus genome assembly, chromosome: 2.
OX030888.1:227699497-227699514
CAACAAAGACAGTTTTTTTGTGAATTAAGC227699497ACGATTTTTCACCTGCAGCTAAAGCCATGGGTATTTTCATCCCAATAA
Trichobilharzia szidati genome assembly, chromosome: 5.
OX235275.1:48296646-48296663
GCAAGCGTCCTAACCACTATACCACCAACC48296646ACGATTTTTCACCTGCAGGCTGAATATTTGGATACGTGTGCAGCAATG
Nomada ruficornis genome assembly, chromosome: 16.
OX637861.1:7969234-7969251
ATTGATATTGAACGATGAAAACTGTCTACA7969234ACGATTTTTCACCTGCAGCCCCCCGAAAGAACGAGAAGAAACAGAATC
Patella ulyssiponensis genome assembly, chromosome: 7.
OY783231.1:27222995-27223012
ATCGGGATTTTCCGGTGTGGTATGAACCAA27222995ACGATTTTTCACCTGCAGTTCCAAACAAAGGGGGTTGGGTGGTCTAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACGATTTTTCACCTGCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGATTTTTCACCTGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.268 | 0.259 | search_plus_done; http://172.18.8.135:50400/match?q=ACGATTTTTCACCTGCAG&k=0&no_gap=0&offset=0&limit=50
0.327 | 0.059 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCAGGTGAAAAATCGT&k=0&no_gap=0&offset=0&limit=0
0.327 | 0.000 | cgi_end;

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