GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:08:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS42L23.
DH961586.1:335-354
AGAAGAGACGCGAGGCCACAGATGACGACG335ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea DNA, clone: SACT14J12.
DH964493.1:308-327
AGAAGAGACGCGAGGCCACGGATGACGACG308ACGCCACCAGAGAGAACAATAGCCCGTAAGAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea DNA, clone: KICT07I10.
DH966673.1:16-35
CCACAGATGACGACG16ACGCCACCAGAGAGAACAATAGCACGTAAGAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:28521190-28521209
AGATGAGATGCGCGGCCACGAATAACGACA28521190ACGCCACCAGAGAGAACAATAGCAGGTAATAGAGAGAGAAGAGAAAAGGG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:130839724-130839743
AATAGGAAGGTCTGATTGTGGGTTCCGACG130839724ACGCCACCAGAGAGAACAATAGCATGTAATAGAGAGAGAAGAGAAAATGG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:7578384-7578403
AGATGAGACGCGAAGCCACGGATGATGACG7578384ACGCCACCAGAGAGAACAATAGCAGGTAGGGGTGTTCAAAACCGATCCAT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:9176893-9176912
AGAAGAGACGCGAGGCCACAGATGACGACG9176893ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:4080370-4080389
AGAAGAGACACGAGGCCACGGATGACGACG4080370ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:128216595-128216614
AATAGGAAGGTCTGATTGTGGGTTCCGACG128216595ACGCCACCAGAGAGAACAATAGCATGTAATAGAGAGAGAAGAGAAAATGG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:7701993-7702012
AGATGAGACGCGAAGCCACGGATGATGACG7701993ACGCCACCAGAGAGAACAATAGCAGGTAGGGGTGTTCAAAACCGATCCAT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:9822647-9822666
AGAAGAGACGCGAGGCCACAGATGACGACG9822647ACGCCACCAGAGAGAACAATAGCACGTAATAGAGAGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:22372173-22372192
CTTTTCTCTTTTCTCTCTCTATTATGTGCT22372173ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGACTAAGGAAAGACCG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:137416009-137416028
CTCTCTCTCTCTCTCTCTCTCTTACGGGCT137416009ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGCCTCGCGTCTCTTCT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:17264250-17264269
CCCTTTTCTCTTCTTTCTCTATTACGTGCT17264250ATTGTTCTCTCTGGTGGCGTCGTCGGAACCCACAATCAGACCTTCCTATT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:135899211-135899230
CTCTCTCTCTCTCTCTCTCTCTTACGGGCT135899211ATTGTTCTCTCTGGTGGCGTCGTCGTCATCCGTGGCCTCGCGTCTCTTCT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:18007795-18007814
CCCTTTTCTCTTCTTTCTCTATTACGTGCT18007795ATTGTTCTCTCTGGTGGCGTCGTCGGAACCCACAATCAGACCTTCCTATT
Caenorhabditis uteleia genome assembly, chromosome: II.
OY752134.1:12093827-12093846
TGATTTACCTCAAACCATCGACGATCCACA12093827ATTGTTCTCTCTGGTGGCGTCTTGTTTTTATCGAATTTCACAATTTCGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACGCCACCAGAGAGAACAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACGCCACCAGAGAGAACAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.148 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCCACCAGAGAGAACAAT&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGTTCTCTCTGGTGGCGT&k=0&no_gap=0&offset=0&limit=39
0.178 | 0.004 | cgi_end;

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