GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:36:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gobio gobio genome assembly, chromosome: 14.
OX442387.1:26595608-26595627
ATTCTGATTCATATCCTGCAGAGTTCAGAC26595608ACTGGCCATGTTACTGCCTCTTAGGCAGGCCAACTCCACTGTTCCAGAAC
Rutilus rutilus genome assembly, chromosome: 18.
OX637950.1:18045977-18045996
AATTGCCGTCATATCCTGCAGAGTTCAGAC18045977ACTGGCCATGTTACTGCCTCTTATAGGCAGGCCAACTCCACTGTTCCAGA
Arachis hypogaea DNA, clone: AHGS47A18.
DH961701.1:64-83
AATATGACAAGTTTGCCAAATATAGACTAC64ACTGGCCATGTTACTGCCTCATATCCTGTAAACTCGAAATCAAATGCTGT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:143462121-143462140
AATATGACAAGTTTGCCAAATATAGACTAC143462121ACTGGCCATGTTACTGCCTCATATCCTGTAAACTCGAAATCAAATGCTGT
Moritella sp. 36 chromosome, complete genome.
CP056120.1:4901744-4901763
TAAACAGAAGCTTGCGGCAATGATGGTTTT4901744ACTGGCCATGTTACTGCCTCAGGGTCACTGAATGTTTGTGGAATATCGCG
Squalius cephalus genome assembly, chromosome: 17.
OX439263.1:17838714-17838733
TCCTGAACAGTGGAGTTGGCCTGCCTATAA17838714GAGGCAGTAACATGGCCAGTGTCTGAACCCTGCAGGATATGACGGCAAGC
Arachis hypogaea DNA, clone: AHGS40B18.
DH961971.1:188-207
ACAGCATTTGATTTCGAGTTTACAGGATAT188GAGGCAGTAACATGGCCAGTGTAGTCTATATTTGGCAAACTTGTCATATT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:144063719-144063738
ACAGCATTTGATTTCGAGTTTACAGGATAT144063719GAGGCAGTAACATGGCCAGTGTAGTCTATATTTGGCAAACTTGTCATATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACTGGCCATGTTACTGCCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACTGGCCATGTTACTGCCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.140 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=ACTGGCCATGTTACTGCCTC&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGCAGTAACATGGCCAGT&k=0&no_gap=0&offset=0&limit=45
0.197 | 0.002 | cgi_end;

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