GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 13:45:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

hhe0013da07.g1 hhe Oryza ridleyi genomic clone hhe0013da07, genomic survey sequence.
EI097233.1:552-571
GGGCGCGGCATGGTTGACAAAGGAAGAGCG552AGAACAACAAGGGAGCGAGAAGTTGCAAGAGCAAGTGTTTGTAGAAGCTG
ICPM1E10 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1E10 5', genomic survey sequence.
FI131384.1:572-591
ATCACCTGCNACATAATTTAAACATATACN572AGAACAACAAGGGAGCGAGAAACATCTCACTCAGTTTCAGGTGCAGAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAACAACAAGGGAGCGAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAACAACAAGGGAGCGAGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.145 | 0.135 | search_plus_done; http://172.18.8.135:50400/match?q=AGAACAACAAGGGAGCGAGA&k=0&no_gap=0&offset=0&limit=50
0.161 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCGCTCCCTTGTTGTTCT&k=0&no_gap=0&offset=0&limit=48
0.161 | 0.000 | cgi_end;

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