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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-07 12:01:14, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rupicapra rupicapra genome assembly, chromosome: 20.
OZ022290.1:20771525-20771544
GCAAGGGATCTCTCTGGGGCCTTGTCTATA20771525AGAACCCTAATCCCAACCCTGCAGCCTCCACCGTCTTGAGCTAATCACCA
Sequence 34 from Patent WO2012088289.
JA817697.1:338-357
AGACCCGACCAATTGTTCCCCCTCAGCAGC338AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTTCAG
Sequence 34 from patent US 9702013.
KH919224.1:338-357
AGACCCGACCAATTGTTCCCCCTCAGCAGC338AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTTCAG
Sequence 34 from patent US 10590490.
MO959501.1:338-357
AGACCCGACCAATTGTTCCCCCTCAGCAGC338AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTTCAG
BN18DYSC_UP_145_E09_3APR2008_071 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG565235.1:197-216
AGACCCGACCAATTGTTCCCCCTCAGCAGC197AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
MLN2_2400 Brassica rapa mature lateral nectary, normalized (MLN2) Brassica rapa cDNA similar to electron carrier/ heme binding / iron ion binding, mRNA sequence.
GR722378.1:211-230
AGACCCGACCAATTGTTCCCCCTCAGCAGC211AGAACCCTAATCCCAACCCTAGCTTGGGACAACCTACACCGAATCTCCAG
298j_A11_001 ovule cDNA library of a seedless grape (Vitis vinifera var.Thomson seedless) Vitis vinifera cDNA, mRNA sequence.
GR905270.1:579-598
CTCATCTGCTGGCCTTACTGAGAGCCACCC579AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_2291.
FX700381.1:315-334
AGACCCGACCAATTGTTCCCCCTCAGCAGC315AGAACCCTAATCCCAACCCTAGCGTGGGACAGCCTACACCGAATCTCCAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10813.
FX734806.1:326-345
AGACCCGACCAATTGTTCCCCCTCAGCAGC326AGAACCCTAATCCCAACCCTAGCGTGGGACAGCCTACACCGAATCTCCAG
BONBU82TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONBU82, genomic survey sequence.
BZ440697.1:630-649
TCCAGACTCGGCCAATTGTTCCGCCTCAGC630AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
BOT01-45F10TR BOT01 Brassica oleracea genomic clone BOT01-45F10, genomic survey sequence.
FI704218.1:423-442
TCCAGACTCGGCCAATTGTTCCGCCTCAGC423AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
Prunus dulcis DNA, pseudomolecule Pd08.
AP019304.1:15722092-15722111
CAGCATACATCTTCCTTATTGCTAATTACT15722092AGAACCCTAATCCCAACCCTGAACACTAACTAGAACCCTAACGGTCGGAA
Prunus speciosa IZO01 DNA, chromosome 8, sequence.
AP029596.1:24720998-24721017
CAGCATACATCTTCCTTCTTGCTAATTACT24720998AGAACCCTAATCCCAACCCTGAACACTAACTTGAAGCCTAGGTCGGAAAT
Prunus speciosa IZO01 DNA, chromosome 8.
AP038362.1:23503722-23503741
CAGCATACATCTTCCTTCTTGCTAATTACT23503722AGAACCCTAATCCCAACCCTGAACACTAACTTGAAGCCTAGGTCGGAAAT
Prunus speciosa IZO01 DNA, chromosome 8.
AP038370.1:24137961-24137980
CAGCATACATCTTCCTTCTTGCTAATTACT24137961AGAACCCTAATCCCAACCCTGAACACTAACTTGAAGCCTAGGTCGGAAAT
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 07.
CP140991.1:20964324-20964343
CTCATCTGCTGGCCTTACTGAGAGCCACCC20964324AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Black Monukka isolate seedless chromosome 07.
CP141010.1:21072159-21072178
CTCATCTGCTGGCCTTACTGAGAGCCACCC21072159AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Thompson Seedless isolate seedless chromosome 07.
CP142490.2:20958863-20958882
CTCATCTGCTGGCCTTACTGAGAGCCACCC20958863AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Brassica napus cultivar Xiang5A chromosome 10.
CP151905.1:21665836-21665855
AGACCCGACCAATTGTTCCCCCTCAGCAGC21665836AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
Brassica napus cultivar Xiang5A chromosome 19.
CP151914.1:60140865-60140884
TCCAGACTCGGCCAATTGTTCCGCCTCAGC60140865AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 07.
CP161580.1:21327117-21327136
CTCATCTGCTGGCCTTACTGAGAGCCACCC21327117AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 07.
CP161599.1:22673927-22673946
CTCATCTGCTGGCCTTACTGAGAGCCACCC22673927AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Muscat Hamburg chromosome 07.
CP161656.1:21679493-21679512
CTCATCTGCTGGCCTTACTGAGAGCCACCC21679493AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Manicure Finger chromosome 07.
CP161694.1:22505003-22505022
CTCATCTGCTGGCCTTACTGAGAGCCACCC22505003AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Hongmunage chromosome 07.
CP161751.1:22293928-22293947
CTCATCTGCTGGCCTTACTGAGAGCCACCC22293928AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Vitis vinifera cultivar Baimunage chromosome 07.
CP161789.1:22198710-22198729
CTCATCTGCTGGCCTTACTGAGAGCCACCC22198710AGAACCCTAATCCCAACCCTAGTCCAATATCGAATTCTGTAACTGTGAAG
Brassica napus genome assembly, chromosome: A10.
HG994364.1:15711794-15711813
AGACCCGACCAATTGTTCCCCCTCAGCAGC15711794AGAACCCTAATCCCAACCCTAGCGTGGGACAGCCTACACCGAATCTCCAG
Brassica napus genome assembly, chromosome: C09.
HG994373.1:57016358-57016377
TCCAGACTCGGCCAATTGTTCCGCCTCAGC57016358AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
Brassica rapa genome, scaffold: A10.
LR031577.1:12628572-12628591
AGACCCGACCAATTGTTCCCCCTCAGCAGC12628572AGAACCCTAATCCCAACCCTAGCGTGGGACAGCCTACACCGAATCTCCAG
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:55165240-55165259
TCCAGACTCGGCCAATTGTTCCGCCTCAGC55165240AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTCCAG
Brassica rapa genome assembly, chromosome: A10.
LS974626.2:15384927-15384946
AGACCCGACCAATTGTTCCCCCTCAGCAGC15384927AGAACCCTAATCCCAACCCTAGCGTGGGACAGCCTACACCGAATCTCCAG
Chionographis japonica genome assembly, chromosome: 5.
OX393553.1:54897000-54897019
TCCCATGTCTTCTACTCCAGGGTTTGCAAC54897000AGAACCCTAATCCCAACCCTGACAGACCAAAGACGGCGACTCGCAACGAC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:439010644-439010663
CTAAATCCCCAAACCCAAATCCAGCAGGCT439010644AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:439010699-439010718
CCCAAACCCAAAACCCAAATCCAGCAGGCT439010699AGAACCCTAATCCCAACCCTAAATTCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737463.1:414798582-414798601
CTAAATTCCCAAACCCAAATCCAGCAGGCT414798582AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737477.1:403421773-403421792
CTAAATTCCCAAACCCAAATCCAGCAGGCT403421773AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737484.1:432765500-432765519
CTAAATTCCCAAACCCAAATCCAGCAGGCT432765500AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737499.1:343682705-343682724
CTAAATCCCCAAACCCAAATCCAGCAGGCT343682705AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737499.1:343682760-343682779
CCCAAACCCAAAACCCAAATCCAGCAGGCT343682760AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737506.1:378834329-378834348
CTAAATTCCCAAACCCAAATCCAGTAGGCT378834329AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737643.1:388238376-388238395
CTAAATCCCCAAACCCAAATCCAGCAGGCT388238376AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737643.1:388238431-388238450
CCCAAACCCAAAACCCAAATCCAGCAGGCT388238431AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737657.1:444259711-444259730
CTAAATCCCCAAACCCAAATCCAGCAGGCT444259711AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737657.1:444259766-444259785
CCCAAACCCAAAACCCAAATCCAGCAGGCT444259766AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737869.1:424935323-424935342
CTAAATTCCCAAACCCAAATCCAGCAGGCT424935323AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY740892.1:414798582-414798601
CTAAATTCCCAAACCCAAATCCAGCAGGCT414798582AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY740906.1:403421773-403421792
CTAAATTCCCAAACCCAAATCCAGCAGGCT403421773AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY740913.1:432765500-432765519
CTAAATTCCCAAACCCAAATCCAGCAGGCT432765500AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY740922.1:388238376-388238395
CTAAATCCCCAAACCCAAATCCAGCAGGCT388238376AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY740922.1:388238431-388238450
CCCAAACCCAAAACCCAAATCCAGCAGGCT388238431AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY740936.1:444259711-444259730
CTAAATCCCCAAACCCAAATCCAGCAGGCT444259711AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY740936.1:444259766-444259785
CCCAAACCCAAAACCCAAATCCAGCAGGCT444259766AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY740958.1:343682705-343682724
CTAAATCCCCAAACCCAAATCCAGCAGGCT343682705AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY740958.1:343682760-343682779
CCCAAACCCAAAACCCAAATCCAGCAGGCT343682760AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY740965.1:378834329-378834348
CTAAATTCCCAAACCCAAATCCAGTAGGCT378834329AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741408.1:439010644-439010663
CTAAATCCCCAAACCCAAATCCAGCAGGCT439010644AGAACCCTAATCCCAACCCTAAATCCCCAAACCCAAAACCCAAATCCAGC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY741408.1:439010699-439010718
CCCAAACCCAAAACCCAAATCCAGCAGGCT439010699AGAACCCTAATCCCAACCCTAAATTCCCAAATGCAGCAGGCTAGAACCCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY741416.1:424935323-424935342
CTAAATTCCCAAACCCAAATCCAGCAGGCT424935323AGAACCCTAATCCCAACCCTAAATCCCCAAATGCAGCAGGCTAGAACCCT
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:761496135-761496154
TCGTCCTCCTCCCTATTTTCTCCTACTCCG761496135AGAACCCTAATCCCAACCCTGCCACACCTTCTGCTTACGACGAGCTCCGC
Prunus dulcis genome assembly, chromosome: 8.
OZ022204.1:22605578-22605597
CAGCATACATCTTCCTTATTGCTAATTACT22605578AGAACCCTAATCCCAACCCTGAACACTAACTAGAACCCTAACGGGTCGGA
Prunus dulcis genome assembly, chromosome: 8.
OZ022213.1:23229379-23229398
CAGCATACATCTTCCTTATTGCTAATTACT23229379AGAACCCTAATCCCAACCCTGAACACTAACTAGAACCCTAACGGGTCGGA
Prunus armeniaca genome assembly, chromosome: 8.
OZ046367.2:17924102-17924121
CAGCATACATCTTCCTTATTGCTAATTACT17924102AGAACCCTAATCCCAACCCTGAACACTAACTTGAACCCTAAAGGGTCGGA
Adonis annua genome assembly, chromosome: 1.
OZ123176.1:598222290-598222309
AATCCCAAACCCTAATCCCAACCCTAATCC598222290AGAACCCTAATCCCAACCCTAATGCCAAACCCATATCCAAAACTCCTAAT
Adonis annua genome assembly, chromosome: 6.
OZ123181.1:480277388-480277407
TAATCCCAACCCTTATCCCAACCCTAAACC480277388AGAACCCTAATCCCAACCCTAATCCAAAACCCTGCTAACGCTAATTACAA
Adonis annua genome assembly, chromosome: 7.
OZ123182.1:224836028-224836047
TTAAACCAAGTGAACTCCCAACCCTAATCC224836028AGAACCCTAATCCCAACCCTAATGCAAACCCTAATACAAAAACCTAATCC
Adonis annua genome assembly, chromosome: 10.
OZ123185.1:284149947-284149966
CTAATCCCAACCCTAATGCCAACCCTAATG284149947AGAACCCTAATCCCAACCCTAACGCCAACCCTAATCCCAAATTCTAATCC
Adonis annua genome assembly, chromosome: 14.
OZ123189.1:391304075-391304094
ATTCCAAACCCTAATCCCAAACCCTAATAC391304075AGAACCCTAATCCCAACCCTAATACAAAACCTTAATCCCATCCCTAATAC
Brassica nigra genome assembly, chromosome: 2.
OZ173172.1:36550670-36550689
AGACCCGACCAATTGTTCCCCCTCAGCAGC36550670AGAACCCTAATCCCAACCCTAGCTTGGGACAGCCTACACCGAATCTTCAG
Prunus armeniaca genome assembly, chromosome: 8.
OZ177844.1:18563894-18563913
CAGCATACATCTTCCTTATTGCTAATTACT18563894AGAACCCTAATCCCAACCCTGAACACTAACTTGAACCCTAAAGGGTCGGA
Prunus brigantina genome assembly, chromosome: 8.
OZ184549.1:21921631-21921650
CAGCATACATCTTCCTTATTGCTAATTACT21921631AGAACCCTAATCCCAACCCTGAACACTAACTTGAACCCTAAAGGGTCGGA
Luidia sarsii genome assembly, chromosome: 19.
OX465119.1:8199217-8199236
ATCCTAACCCTAATCCTAATCCTAACCCTA8199217AGAACCCTAATCCCAACCCTTATCCTAATCCTTACTCTATCCCTAACGCC
Arenicola marina genome assembly, chromosome: 17.
OZ025264.1:10890287-10890306
TCTTTCATGCCACTAACCCTAACCAGAACC10890287AGAACCCTAATCCCAACCCTAGCCATGGCCCTAACCTAACCCTAACCTAA
Salmo trutta genome assembly, chromosome: 7.
LR584430.1:13743593-13743612
ACAGACAGACAGACAGACAGACAGACAGAC13743593AGAACCCTAATCCCAACCCTAAACCTAATCACTAACCCTAAACCTAAACC
Lissotriton helveticus genome assembly, chromosome: 5_1.
OZ180050.1:561318267-561318286
AGCCCTAGGTCAGATAACCTTTGGCCAATG561318267AGAACCCTAATCCCAACCCTAACCAGTCAGAACATTAGCCCTAAGCCCTA
Lissotriton vulgaris genome assembly, chromosome: 5.
OZ183357.1:520126368-520126387
AGCCCTAGGTCAGATAACCTTTGGCCAATG520126368AGAACCCTAATCCCAACCCTAACCAGTGAGAACATTAGCCCTAAGCTCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AGAACCCTAATCCCAACCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AGAACCCTAATCCCAACCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.556 | 0.547 | search_plus_done; http://172.18.8.135:50800/match?q=AGAACCCTAATCCCAACCCT&k=0&no_gap=0&offset=0&limit=50
0.783 | 0.227 | search_minus_done; http://172.18.8.135:50800/match?q=AGGGTTGGGATTAGGGTTCT&k=0&no_gap=0&offset=0&limit=0
0.783 | 0.000 | cgi_end;

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