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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-21 14:08:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

vsu-ars_004720_LI10Contig_13179 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO779687.1:839-861
TATGAAATTGCTCAATATTTTCTGCTGAGA839AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATCCTG
vsu-ars_022617_LI15contig_8181 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO797584.1:962-984
TATGAAATTGCTCAATATTTTCTGCTGAGA962AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATCCTG
TSA: Cajanus cajan cultivar UPAS 120 contig22289.UPAS mRNA sequence.
EZ640006.1:1053-1075
TATGAAATTGCTCAACATTTTCTTCTGAGA1053AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATCCTG
TSA: Cajanus cajan cultivar Asha contig25841.Asha mRNA sequence.
EZ673705.1:1028-1050
TATGAAATTGCTCAACATTTTCTTCTGAGA1028AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATCCTG
PV_GBb116O11.F PV_GBb Phaseolus vulgaris genomic 5', genomic survey sequence.
JY553853.1:905-927
TATGAAATTGCTCAATATTTTCTGCTGAGA905AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATCCTG
Cicer arietinum chromosome Ca3.
CP039333.1:25636098-25636120
TATGAAATTGCTCAACATTTTCTTCTGAGA25636098AGACCCATCTCACAATAGCCAGATTTGATATAAGTCGATAGCCCATCATTCGG
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:28458497-28458519
TATGAAATTGCTCAATATTTTCTGCTGAGA28458497AGACCCATCTCACAATAGCCAGATTTGAAACGAGTCGATAACCCATCATCCTG
Cicer arietinum chromosome Ca3.
CP040768.1:25636098-25636120
TATGAAATTGCTCAACATTTTCTTCTGAGA25636098AGACCCATCTCACAATAGCCAGATTTGATATAAGTCGATAGCCCATCATTCGG
Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:37935558-37935580
TATGAAATTGCTCAATATTTTCTGCTGAGA37935558AGACCCATCTCACAATAGCCAGATTTGAAACAAGTCGATAACCCATCATCCTG
Vicia faba genome assembly, chromosome: 5.
OX451740.1:521829407-521829429
AATGAAATTGCTCAACATTTTCTTCTGAGA521829407AGACCCATCTCACAATAGCCAGATTTGATATAAGGCGATAGCCCATCATTCGG
Trifolium dubium genome assembly, chromosome: 4.
OX638065.1:40865219-40865241
TGTGAAATTGCTCAATATTTTCTTCTGAGA40865219AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATGCGG
Trifolium dubium genome assembly, chromosome: 11.
OX638072.1:28563500-28563522
TGTGAAATTGCTCAATATTTTCTTCTGAGA28563500AGACCCATCTCACAATAGCCAGATTTGATACAAGTCGATAACCCATCATTCGG
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:541198477-541198499
AATGAAATTGCTCAATATTTTCTTCTGAGA541198477AGACCCATCTCACAATAGCCAGATTTGATATAAGCCGGTAGCCCATCATTCGG
Sequence 23830 from patent US 9012723.
HK587484.1:1017-1039
CAGGATGATGGGTTATCGGCTTGTTTCAAA1017TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
Sequence 23651 from patent US 9029636.
HK932714.1:915-937
CAGGATGATGGGTTATCGGCTTGTTTCAAA915TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
Sequence 68073 from patent US 9029636.
HK977136.1:930-952
CAGGATGATGGGTTATCGACTTGTTTCAAA930TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
WO 2016109619-A/56: SCN PLANTS AND METHODS FOR MAKING THE SAME.
LF632827.1:1928-1950
CAGGATGATGGGTTATCGGCTTGTTTCAAA1928TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
Sequence 56 from patent US 10457956.
MO463309.1:1928-1950
CAGGATGATGGGTTATCGGCTTGTTTCAAA1928TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
se51b03.y1 Gm-c1017 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1017-2406 5' similar to SW:CB80_HUMAN Q09161 80 KD NUCLEAR CAP BINDING PROTEIN, mRNA sequence.
AW306466.1:484-506
CAGGATGATGGGTTATCAGCTTGTTTCAAA484TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
UCRVU04_CCNI460_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1 Vigna unguiculata cDNA clone CCNI460, mRNA sequence.
FC456789.1:186-208
CAGGATGATGGGTTATCGACTCGTTTCAAA186TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
ocpsga0_0256_G12.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO028480.1:446-468
CAGGATGATGGGTTATCGACTTGTTTCAAA446TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
CccaBb028-E1JF CccABb Cajanus cajan genomic clone CccaBb028-E1, genomic survey sequence.
FI237290.1:167-189
CAGGATGATGGGTTATCGACTTGTATCAAA167TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTTGAGCAATTTCATA
CccaBb052-J8JF CccABb Cajanus cajan genomic clone CccaBb052-J8, genomic survey sequence.
FI260900.1:178-200
CAGGATGATGGGTTATCGACTTGTATCAAA178TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTTGAGCAATTTCATA
PV_GBb090G15.F PV_GBb Phaseolus vulgaris genomic 5', genomic survey sequence.
JY594384.1:613-635
CAGGATGATGGGTTATCGACTTGTATCAAA613TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
PV_GBb210L01.F PV_GBb Phaseolus vulgaris genomic 5', genomic survey sequence.
JY641858.1:616-638
CAGGATGATGGGTTATCGACTTGTATCAAA616TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M021L17, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC272946.1:97008-97030
CAGGATGATGGGTTATCGACTCGTTTCAAA97008TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M056A21, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces.
AC273997.1:59146-59168
CAGGATGATGGGTTATCGACTCGTTTCAAA59146TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M029D20, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces.
AC274127.1:81683-81705
CAGGATGATGGGTTATCGACTCGTTTCAAA81683TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Medicago truncatula chromosome 7 clone mth2-19e15, complete sequence.
AC149131.3:47736-47758
CCGAATGATGAGCTATAGACTTGTATCAAA47736TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCATA
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:31884598-31884620
CAGGATGATGGGTTATCGACTTGTATCAAA31884598TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:17830787-17830809
CCGAATGATGGGTTATCGACTTGTATCAAA17830787TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCACA
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:18776017-18776039
CCGAATGATGGGTTATCGACTTGTATCAAA18776017TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCACA
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:4747757-4747779
CAGGATGATGGGTTATCGGCTTGTTTCAAA4747757TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATA
Medicago truncatula ABH1 mRNA, partial cds.
KM398981.1:1662-1684
CCGAATGATGAGCTATAGACTTGTATCAAA1662TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCATA
Phaseolus vulgaris ABH1 mRNA, partial cds.
KM398990.1:1662-1684
CAGGATGATGGGTTATCGACTTGTATCAAA1662TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Phaseolus vulgaris AT3G27640 mRNA, partial sequence.
KY540664.1:1821-1843
CAGGATGATGGGTTATCGACTTGTATCAAA1821TCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATA
Phytolacca americana AT3G27640 mRNA, partial sequence.
KY540715.1:1824-1846
TCGCATGATGGGTTATCGTCTTTTGTCTAA1824TCTGGCTATTGTGAGATGGGTCTTCTCTCCAGCAAATGTTGAACAATATCACA
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:18408921-18408943
CCGAATGATGGGTTATCGACTTATATCAAA18408921TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCACA
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:31533860-31533882
CCGAATGATGGGTTATCGACTTGTATCAAA31533860TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCACA
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:16300256-16300278
CCGAATGATGAGCTATCGGCTTGTATCAAA16300256TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTCGAGCAATTTCATA
Astragalus glycyphyllos genome assembly, chromosome: 6.
OY754312.1:46282908-46282930
CAGAATGATGGGTTATCGGCTTGTATCGAA46282908TCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTTGAGCAATTTCATA
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:145050358-145050380
CCGAATGATGGGCTACCGGCTTATATCAAA145050358TCTGGCTATTGTGAGATGGGTCTTTTCAGAAGAAAATATTGAGCAATTTCATT

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