GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:13476225-13476246

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13476225AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGGAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:20204553-20204574

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20204553AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:28814328-28814349

ATGTAGAAAGTTAAGAAATTTAAGAGATAC28814328AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:2982652-2982673

GTGTAGAAAGTTAAGAAATTGAAGAGATAT2982652AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:25829231-25829252

GTATAGAAAGTTAAGAAATTAAAGAGATAT25829231AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:26801577-26801598

GTGTAGAAAGTTAAGAAATTGAAGAGAGAC26801577AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:24635102-24635123

GCGTAGAAAGTTAAGAAATTGAAGAGATAT24635102AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:11187105-11187126

ATGTAGAAAGTTAAAAAATTGAAGAGATAT11187105AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:13657989-13658010

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13657989AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:20574535-20574556

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20574535AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:30496956-30496977

ATGTAGAAAGTTAAGAAATTGAAGAGATAC30496956AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:3023386-3023407

GTGTAGAAAGTTAAGAAATTGAAGAGATAT3023386AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:27573035-27573056

GTATAGAAAGTTAAGAAATTAAAGAGATAC27573035AGAGAAAATTTGATGAGTATCGAAGAAAATTTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2118466-2118487

GTATAAAAAGTTAAGAAATTGAAGAGATAC2118466AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATATGTTTGG

Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:11715208-11715229

GTGTAGAAAGTTAAAAAATTGAAGAGATAC11715208AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:12568906-12568927

GTGTTAAAAGTTAAGAAATTGAAGAGATAC12568906AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGGAAATGTGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:3042201-3042222

GTGTAGAAAGTTAAGAAATTGAAGAGATAT3042201AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAATGTGTTTGGA

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:25613530-25613551

GTATAGAAAGTTAAGAAATTAAAGAGATAC25613530AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:26589221-26589242

GTGTAGAAAGTTAAGAAATTGAAGAGAGAC26589221AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2233943-2233964

GTATAAAAAGTTAAGAAATTGAAGAGATAC2233943AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATATGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:24916037-24916058

GCGTAGAAAGTTAAGAAATTGAAGAGATAT24916037AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:10705797-10705818

ATGTAGAAAGTTAAAAAATTGAAGAGATAT10705797AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT

Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:3542127-3542148

ATGTATAAAGTTAAGAAATTGAAGAGATAT3542127AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAAAATGTG

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:13569313-13569334

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13569313AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:20471084-20471105

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20471084AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:3151065-3151086

GTGTAGAAAGTTAAGAAATTGAAGAGATAT3151065AGAGAAAATTTGATGAGTATCGATGAAAATTAGAAGAAGAAATGTGTTTGGA

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:24987912-24987933

GTATAGAAAGTTAAGAAATTAAAGAGATAC24987912AGAGAAAATTTGATGAGTATCGAAGAAAATTAAAAGAAGAAAATTTGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:25982896-25982917

GTGTAGAAAGTTAAGAAATTGAAGAGAGAC25982896AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:26008210-26008231

GCGTAGAAAGTTAAGAAATTGAAGAGATAT26008210AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATATGTTTGG

Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:11356116-11356137

ATGTAGAAAGTTAAAAAATTGAAGAGATAT11356116AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT

Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:13257703-13257724

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13257703AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:20067161-20067182

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20067161AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2107120-2107141

GTATAAAAAGTTAAGAAATTGAAGGGATAC2107120AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:29712399-29712420

ATGTAGAAAGTTAAGAAATTGAAGAGATAC29712399AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:3814011-3814032

ATGTATAAAGTTAAGAAATTGAAGAGATAT3814011AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:13889964-13889985

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13889964AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGAGAATGTG

Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:12862912-12862933

GTGTATAAAGTTAAGAAATTGAAGTGATAT12862912AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:27559718-27559739

ATGTAGAAAGTTAAGAAATTGAAGAGATAT27559718AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:3547428-3547449

ATGTATAAAGTTAAGAAATTGAAGAGATAT3547428AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:9624666-9624687

GTGTTAAAAGTTAAGAAATTGAAGAGATAC9624666AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:16650495-16650516

GTGTAGAAAGTTAAGAAATTGAAGAGATAC16650495AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:29016305-29016326

ATGTAGAAAGTTAAGAAATTGAAGAGATAC29016305AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2293471-2293492

GTATAAAAAGTTAAGAAATTGAAGAGATAC2293471AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG

Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:3852142-3852163

ATGTATAAAGTTAAGAAATTGAAGAGATAT3852142AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU696677.1:10121867-10121888

GTGTTAAAAGTTAAGAAATTGAAGAGATAC10121867AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU696677.1:16805579-16805600

GTGTAGAAAGTTAAGAAATTGAAGAGATAC16805579AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 2.
OU696678.1:33465451-33465472

GTGTTTAAAGTTAAGAAATTGAAGAGATAC33465451AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 3.
OU696679.1:30298222-30298243

ATGTAGAAAGTTAAGAAATTGAAGAGATAC30298222AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 11.
OU696687.1:2285232-2285253

GTATAAAAAGTTAAGAAATTGAAGAGATAC2285232AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG

Malus domestica genome assembly, chromosome: 17.
OU696693.1:3774596-3774617

ATGTATAAAGTTAAGAAATTGAAGAGATAT3774596AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744542.1:13711593-13711614

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13711593AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744542.1:20513162-20513183

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20513162AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 11.
OU744552.1:2350049-2350070

GTATAAAAAGTTAAGAAATTGAAGAGATAC2350049AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG

Malus domestica genome assembly, chromosome: 17.
OU744558.1:3710921-3710942

ATGTATAAAGTTAAGAAATTGAAGAGATAT3710921AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744953.1:13166097-13166118

GTGTTAAAAGTTAAGAAATTGAAGAGATAC13166097AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744953.1:20081172-20081193

GTGTAGAAAGTTAAGAAATTGAAGAGATAC20081172AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 11.
OU744963.1:2374779-2374800

GTATAAAAAGTTAAGAAATTGAAGAGATAC2374779AGAGAAAATTTGATGAGTATCGAAGAAAATTAGGAGAAGAAAATCTGTTTGG

Malus domestica genome assembly, chromosome: 17.
OU744969.1:3818038-3818059

ATGTATAAAGTTAAGAAATTGAAGAGATAT3818038AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744991.1:9938912-9938933

GTGTTAAAAGTTAAGAAATTGAAGAGATAC9938912AGAGAAAATTTGATGAGTATCGAAGAAAATTATAAGAAGGAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 1.
OU744991.1:16753355-16753376

GTGTAGAAAGTTAAGAAATTGAAGAGATAC16753355AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus domestica genome assembly, chromosome: 17.
OU745007.1:4128932-4128953

ATGTATAAAGTTAAGAAATTGAAGAGATAT4128932AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Malus x robusta genome assembly, chromosome: 1.
OY720325.1:10886585-10886606

ATGTAGAAAGTTAAAAAATTGAAGAGATAT10886585AGAGAAAATTTGATGAGTATCGAATAAAATTAGAAGAAGAAAATGTGTTTGT

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:16875304-16875325

GCATAGAAAGATAAGAAATTGAAGAGATAC16875304AGAGAAAATTTGATGAGTATCGAAGAAAATAAGAAGAAGAAAATGCGTTTGG

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:36597007-36597028

TGGTTTAAAGTTAAGAAATTGACATGATAC36597007AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:16723527-16723548

GCATAAAAAGTTAAGAAATTAAAGAGATAC16723527AGAGAAAATTTGATGAGTATCGAAGAAAATATGTTTGGAAGGTGAGAATGTG

Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:4651969-4651990

GTGTAGAAAGTTAAGAAAATGAAGAGATAC4651969AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:6802234-6802255

ATCAAACATGCGTGCAATCTCCTTAAGACA6802234AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:13923937-13923958

GTGTAGAAAGTTAAGAAATTGAAGAGATAT13923937AGAGAAAATTTGATGAGTATCGAAGAAAATGTGTTTGGAAGGTGGGAATGTG

Crataegus laevigata genome assembly, chromosome: 17.
OY756954.1:28223020-28223041

GTGTAGAAAGTTAAGAAATTAAAGAGATAC28223020AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAATAAGAAAATGTGTTTGG

Pyrus communis genome assembly, chromosome: 3.
OY757070.1:24167209-24167230

GTATAGAAAGTTAAGAAATCAAAGAGATAC24167209AGAGAAAATTTGATGAGTATCGGACAAAATTAGAAGTAGAAAATGTGTTTGG

Pyrus communis genome assembly, chromosome: 15.
OY757082.1:16662279-16662300

GTGTAGAAAGTTAAGAAATTGAAGAGATAC16662279AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

Pyrus communis genome assembly, chromosome: 16.
OY757083.1:8914251-8914272

GTATAGAAAGTTAAGAAATTGAAGAGATAT8914251AGAGAAAATTTGATGAGTATCGAAGAAAATTAGAAGAAGAAAATGTGTTTGG

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Debug Info:

0.009 | 0.009 | search_start;
0.251 | 0.242 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGAAAATTTGATGAGTATCG&k=0&no_gap=0&offset=0&limit=50
0.416 | 0.165 | search_minus_done; http://172.18.8.135:50400/match?q=CGATACTCATCAAATTTTCTCT&k=0&no_gap=0&offset=0&limit=0
0.416 | 0.000 | cgi_end;

Summary:

Results:

Data Export:

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